Protein–RNA interactions for Protein: O60663

LMX1B, LIM homeobox transcription factor 1-beta, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1BO60663 AC051619.2-201ENST00000559063 397 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC012414.2-201ENST00000559474 187 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC093524.1-201ENST00000564266 1094 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 MIR4420-201ENST00000583944 77 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC068768.2-201ENST00000602352 343 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC117490.2-201ENST00000610042 594 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 Xist_exon4.1-201ENST00000615964 126 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC005899.7-201ENST00000618199 588 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AC010872.1-201ENST00000624225 675 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AL049767.1-202ENST00000637826 242 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LMX1BO60663 RNF19BPY-201ENST00000458209 1550 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 MTND4P9-201ENST00000507819 1346 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 AL627171.1-201ENST00000618845 1308 ntBASIC5.15□□□□□ -1.59
LMX1BO60663 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
LMX1BO60663 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LMX1BO60663 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
LMX1BO60663 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 AC008627.1-201ENST00000517511 1704 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AP001157.1-201ENST00000550837 2339 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AP001002.1-201ENST00000625148 1513 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LMX1BO60663 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 RNA5SP273-201ENST00000362484 113 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 RNU6-819P-201ENST00000364116 107 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 RNA5SP242-201ENST00000364171 118 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 RNU6-670P-201ENST00000364312 104 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 SNORA72.3-201ENST00000365074 132 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 RNA5SP211-201ENST00000365516 117 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LMX1BO60663 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 GAPDHP48-201ENST00000436626 961 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC5.14□□□□□ -1.59
LMX1BO60663 AL663074.2-201ENST00000440621 479 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.14□□□□□ -1.59
LMX1BO60663 FTLP8-201ENST00000446770 267 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AL451063.1-201ENST00000450164 1133 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 RSU1P1-201ENST00000453416 441 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.14□□□□□ -1.59
LMX1BO60663 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC110749.1-201ENST00000462007 357 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 PFN1P6-201ENST00000476786 399 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC025768.1-201ENST00000510057 267 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC114781.3-201ENST00000512083 142 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 SCARNA1-201ENST00000517138 166 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 IGKV2-19-201ENST00000518132 283 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC104997.1-201ENST00000519761 717 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC112191.2-201ENST00000522428 333 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 OR8X1P-201ENST00000534542 869 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AC134349.2-201ENST00000535136 910 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC126615.2-201ENST00000553003 515 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.14□□□□□ -1.59
LMX1BO60663 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 AC020915.5-201ENST00000596836 964 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LMX1BO60663 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.14□□□□□ -1.59
LMX1BO60663 SNORA35B-201ENST00000607417 129 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AC016597.2-201ENST00000613256 341 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AC048344.4-201ENST00000619744 527 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AL049777.1-201ENST00000622740 518 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.14□□□□□ -1.59
LMX1BO60663 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.14□□□□□ -1.59
LMX1BO60663 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 TET1P1-201ENST00000426627 2301 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 AC004076.2-201ENST00000620532 3323 ntBASIC5.14□□□□□ -1.59
LMX1BO60663 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.14□□□□□ -1.59
LMX1BO60663 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC5.14□□□□□ -1.59
LMX1BO60663 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
LMX1BO60663 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LMX1BO60663 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.13□□□□□ -1.59
LMX1BO60663 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
LMX1BO60663 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
LMX1BO60663 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LMX1BO60663 PSG10P-201ENST00000501199 1500 ntBASIC5.13□□□□□ -1.59
LMX1BO60663 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms