Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.04□□□□□ -1.44
O00370 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.04□□□□□ -1.44
O00370 AC091917.2-201ENST00000505002 744 ntBASIC6.04□□□□□ -1.44
O00370 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.04□□□□□ -1.44
O00370 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.04□□□□□ -1.44
O00370 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.04□□□□□ -1.44
O00370 AP001496.3-201ENST00000580230 913 ntBASIC6.04□□□□□ -1.44
O00370 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.04□□□□□ -1.44
O00370 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC6.04□□□□□ -1.44
O00370 AC090607.5-201ENST00000615692 224 ntBASIC6.04□□□□□ -1.44
O00370 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.04□□□□□ -1.44
O00370 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.04□□□□□ -1.44
O00370 MIR193BHG-214ENST00000641765 509 ntBASIC6.04□□□□□ -1.44
O00370 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
O00370 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
O00370 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
O00370 AL121839.2-201ENST00000565058 6943 ntBASIC6.04□□□□□ -1.44
O00370 BCORP1-203ENST00000513194 5093 ntBASIC6.04□□□□□ -1.44
O00370 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.04□□□□□ -1.44
O00370 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
O00370 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.03□□□□□ -1.44
O00370 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC6.03□□□□□ -1.44
O00370 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
O00370 RNA5SP510-201ENST00000364697 99 ntBASIC6.03□□□□□ -1.44
O00370 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
O00370 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6.03□□□□□ -1.44
O00370 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.03□□□□□ -1.44
O00370 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.03□□□□□ -1.44
O00370 AL136231.1-201ENST00000429407 730 ntBASIC6.03□□□□□ -1.44
O00370 AC023271.1-201ENST00000445936 1090 ntBASIC6.03□□□□□ -1.44
O00370 RPS23P9-201ENST00000448848 438 ntBASIC6.03□□□□□ -1.44
O00370 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC6.03□□□□□ -1.44
O00370 AC104849.1-201ENST00000462623 405 ntBASIC6.03□□□□□ -1.44
O00370 RN7SL197P-201ENST00000466981 299 ntBASIC6.03□□□□□ -1.44
O00370 OR7E157P-201ENST00000494376 911 ntBASIC6.03□□□□□ -1.44
O00370 AC090568.1-201ENST00000509499 856 ntBASIC6.03□□□□□ -1.44
O00370 AC021146.10-201ENST00000515628 706 ntBASIC6.03□□□□□ -1.44
O00370 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.03□□□□□ -1.44
O00370 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC6.03□□□□□ -1.44
O00370 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.03□□□□□ -1.44
O00370 AGGF1P7-201ENST00000562369 913 ntBASIC6.03□□□□□ -1.44
O00370 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.03□□□□□ -1.44
O00370 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.03□□□□□ -1.44
O00370 CASC22-201ENST00000569713 386 ntTSL 5 BASIC6.03□□□□□ -1.44
O00370 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.03□□□□□ -1.44
O00370 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.03□□□□□ -1.44
O00370 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
O00370 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
O00370 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
O00370 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC6.03□□□□□ -1.44
O00370 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
O00370 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.03□□□□□ -1.44
O00370 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
O00370 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
O00370 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.02□□□□□ -1.44
O00370 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.02□□□□□ -1.45
O00370 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC6.02□□□□□ -1.45
O00370 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC6.02□□□□□ -1.45
O00370 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.02□□□□□ -1.45
O00370 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
O00370 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 RN7SKP185-201ENST00000362813 326 ntBASIC6.02□□□□□ -1.45
O00370 RNA5SP187-201ENST00000384400 119 ntBASIC6.02□□□□□ -1.45
O00370 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.02□□□□□ -1.45
O00370 SNORA81-201ENST00000408493 178 ntBASIC6.02□□□□□ -1.45
O00370 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 BX119321.1-201ENST00000428912 797 ntBASIC6.02□□□□□ -1.45
O00370 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.02□□□□□ -1.45
O00370 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC6.02□□□□□ -1.45
O00370 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC6.02□□□□□ -1.45
O00370 RNU6-615P-201ENST00000516065 106 ntBASIC6.02□□□□□ -1.45
O00370 CYCSP22-201ENST00000517555 339 ntBASIC6.02□□□□□ -1.45
O00370 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.02□□□□□ -1.45
O00370 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.02□□□□□ -1.45
O00370 AC016839.1-201ENST00000578162 867 ntBASIC6.02□□□□□ -1.45
O00370 DHFRP1-201ENST00000579682 559 ntBASIC6.02□□□□□ -1.45
O00370 MIR4310-201ENST00000582950 57 ntBASIC6.02□□□□□ -1.45
O00370 AC079791.1-201ENST00000605356 973 ntBASIC6.02□□□□□ -1.45
O00370 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.02□□□□□ -1.45
O00370 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC6.02□□□□□ -1.45
O00370 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.02□□□□□ -1.45
O00370 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
O00370 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
O00370 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.02□□□□□ -1.45
O00370 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
O00370 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
O00370 AC068870.1-201ENST00000563737 2455 ntBASIC6.02□□□□□ -1.45
O00370 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
O00370 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms