Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 ASB14-201ENST00000389601 3175 ntAPPRIS ALT2 TSL 5 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 RNA5SP131-201ENST00000365452 119 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 MIR143-201ENST00000385300 106 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 OR3A2-201ENST00000408891 1076 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 METTL15P3-201ENST00000415522 1221 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 REREP1Y-201ENST00000422655 198 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AL354766.1-201ENST00000423396 542 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 TNPO1P1-201ENST00000423641 1138 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 REREP2Y-201ENST00000439103 200 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 EIF3LP3-201ENST00000495197 822 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 DUTP7-201ENST00000507982 486 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC105384.2-201ENST00000508433 640 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC074255.1-201ENST00000511259 501 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 ATP5LP3-201ENST00000514223 304 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC078899.1-201ENST00000521432 1185 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 MIR1273E-201ENST00000581165 102 ntBASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
CLIP2Q9UDT6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC020656.2-201ENST00000613291 5309 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC113412.1-201ENST00000425840 504 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC012075.1-201ENST00000436549 580 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AL450996.1-201ENST00000445574 1202 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 EIF4A1P6-201ENST00000448133 1210 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 OR7E116P-201ENST00000448529 957 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 RSU1P1-201ENST00000453416 441 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 RPS3AP15-201ENST00000483874 781 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 MAL2-207ENST00000522828 603 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 OR8Q1P-201ENST00000526467 655 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 MIR4489-201ENST00000578869 62 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AL589935.2-201ENST00000616471 1231 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AC007683.2-201ENST00000624681 714 ntBASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.69□□□□□ -1.34
CLIP2Q9UDT6 AL137058.3-201ENST00000624531 3099 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 OR4G1P-202ENST00000641173 1788 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 RN7SKP160-201ENST00000363804 340 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 RNA5SP132-201ENST00000364725 118 ntBASIC6.68□□□□□ -1.34
CLIP2Q9UDT6 RN7SKP124-201ENST00000364730 341 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 94.1 ms