Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC079080.1-201ENST00000479841 822 ntBASIC7.14□□□□□ -1.27
ABCA3Q99758 AC068587.1-201ENST00000483613 781 ntBASIC7.14□□□□□ -1.27
ABCA3Q99758 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC7.14□□□□□ -1.27
ABCA3Q99758 AC078899.1-201ENST00000521432 1185 ntBASIC7.14□□□□□ -1.27
ABCA3Q99758 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC7.14□□□□□ -1.27
ABCA3Q99758 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC7.14□□□□□ -1.27
ABCA3Q99758 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC7.14□□□□□ -1.27
ABCA3Q99758 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.14□□□□□ -1.27
ABCA3Q99758 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC7.14□□□□□ -1.27
ABCA3Q99758 CLCN3-209ENST00000513761 6692 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 NRXN3-203ENST00000428277 4219 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 HLTF-203ENST00000465259 5306 ntAPPRIS ALT1 TSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.14□□□□□ -1.27
ABCA3Q99758 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.13□□□□□ -1.27
ABCA3Q99758 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 RNA5SP332-201ENST00000391063 115 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 AC119751.6-201ENST00000416712 186 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC7.13□□□□□ -1.27
ABCA3Q99758 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC7.13□□□□□ -1.27
ABCA3Q99758 AL161722.1-201ENST00000446972 1032 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 RN7SL354P-201ENST00000469282 294 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 AC109464.1-201ENST00000511091 819 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 AC134698.5-201ENST00000519444 336 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 GCSHP4-201ENST00000538792 439 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
ABCA3Q99758 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC7.13□□□□□ -1.27
ABCA3Q99758 MIR3667-201ENST00000581025 74 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 H3F3BP2-201ENST00000583907 357 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 CYCSP1-201ENST00000604815 315 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 MIR6780A-201ENST00000615089 68 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.13□□□□□ -1.27
ABCA3Q99758 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 KAT7-201ENST00000259021 9644 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.13□□□□□ -1.27
ABCA3Q99758 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC7.13□□□□□ -1.27
ABCA3Q99758 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.13□□□□□ -1.27
ABCA3Q99758 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 DIAPH3-206ENST00000465066 2735 ntTSL 1 (best) BASIC7.13□□□□□ -1.27
ABCA3Q99758 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ABCA3Q99758 TLN2-209ENST00000561311 11880 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ABCA3Q99758 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.13□□□□□ -1.27
ABCA3Q99758 OR5M12P-201ENST00000423388 929 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC7.13□□□□□ -1.27
ABCA3Q99758 AC026979.1-201ENST00000492525 396 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.13□□□□□ -1.27
ABCA3Q99758 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC7.13□□□□□ -1.27
ABCA3Q99758 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.13□□□□□ -1.27
ABCA3Q99758 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.12□□□□□ -1.27
ABCA3Q99758 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 AC022819.1-201ENST00000563495 3910 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.12□□□□□ -1.27
ABCA3Q99758 KIAA1217-202ENST00000376451 7383 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 ZNF326-203ENST00000370447 9433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC7.12□□□□□ -1.27
ABCA3Q99758 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 RNA5SP113-201ENST00000410486 84 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 AC007064.3-201ENST00000422608 359 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.12□□□□□ -1.27
ABCA3Q99758 CNOT7P1-201ENST00000429006 852 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC7.12□□□□□ -1.27
ABCA3Q99758 NDUFAF4P2-201ENST00000445374 520 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC7.12□□□□□ -1.27
ABCA3Q99758 RSU1P1-201ENST00000453416 441 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC7.12□□□□□ -1.27
ABCA3Q99758 AC140172.1-201ENST00000502928 141 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC7.12□□□□□ -1.27
ABCA3Q99758 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC7.12□□□□□ -1.27
ABCA3Q99758 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.12□□□□□ -1.27
ABCA3Q99758 PDCD6IPP2-207ENST00000566321 1069 ntBASIC7.12□□□□□ -1.27
ABCA3Q99758 AC007922.3-201ENST00000581648 543 ntTSL 3 BASIC7.12□□□□□ -1.27
ABCA3Q99758 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC7.12□□□□□ -1.27
ABCA3Q99758 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
ABCA3Q99758 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC7.11□□□□□ -1.27
ABCA3Q99758 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
ABCA3Q99758 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC7.11□□□□□ -1.27
ABCA3Q99758 ZRANB1-201ENST00000359653 5695 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
ABCA3Q99758 AL132640.2-201ENST00000559968 1698 ntBASIC7.11□□□□□ -1.27
ABCA3Q99758 AP002530.1-201ENST00000405705 684 ntBASIC7.11□□□□□ -1.27
ABCA3Q99758 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.11□□□□□ -1.27
ABCA3Q99758 AC112498.1-201ENST00000444401 332 ntBASIC7.11□□□□□ -1.27
ABCA3Q99758 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC7.11□□□□□ -1.27
ABCA3Q99758 AC234781.3-201ENST00000452540 973 ntBASIC7.11□□□□□ -1.27
ABCA3Q99758 AC009963.2-201ENST00000453431 138 ntBASIC7.11□□□□□ -1.27
ABCA3Q99758 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.11□□□□□ -1.27
ABCA3Q99758 AC063943.1-201ENST00000465434 453 ntBASIC7.11□□□□□ -1.27
ABCA3Q99758 AL161747.1-201ENST00000480068 358 ntBASIC7.11□□□□□ -1.27
ABCA3Q99758 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC7.11□□□□□ -1.27
ABCA3Q99758 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC7.11□□□□□ -1.27
ABCA3Q99758 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.11□□□□□ -1.27
ABCA3Q99758 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC7.11□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms