Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC083862.1-201ENST00000427378 1242 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC124944.2-201ENST00000429866 1242 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 CRYGGP-201ENST00000443337 145 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 Z83838.1-202ENST00000456225 839 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 SULT1D1P-201ENST00000458020 882 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-599P-201ENST00000459383 107 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-1193P-201ENST00000459461 107 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC092691.2-201ENST00000461787 803 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC110749.1-201ENST00000462007 357 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RN7SL860P-201ENST00000473738 223 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 OR2A3P-201ENST00000493774 953 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 CBX1-205ENST00000495350 550 ntTSL 2 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC106800.2-201ENST00000514009 1103 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC007115.1-201ENST00000546853 234 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC104229.1-201ENST00000561364 255 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC002519.2-203ENST00000567043 837 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RN7SL404P-201ENST00000582421 281 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 U6.42-201ENST00000618440 107 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-368P-201ENST00000620928 107 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 MIR6730-201ENST00000622213 67 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 RNU6-538P-201ENST00000622329 107 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC015804.1-201ENST00000622935 435 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 AC099654.13-201ENST00000639774 207 ntBASIC7.52□□□□□ -1.2
SYNGAP1Q96PV0 ZNF559-ZNF177-203ENST00000541595 2435 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 ZNF840P-201ENST00000504759 1996 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AL391262.1-201ENST00000556558 1992 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 SLC39A12-202ENST00000377371 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC092451.3-201ENST00000625067 1343 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AL049737.1-201ENST00000413920 1403 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 CLEC2D-202ENST00000261340 935 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 RNU4-92P-201ENST00000363783 136 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 TINAG-202ENST00000370864 692 ntTSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC104843.2-201ENST00000427666 297 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 MTND5P2-201ENST00000442927 1142 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 RPS6P2-201ENST00000454208 705 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC104689.1-201ENST00000473356 768 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 H3F3AP3-201ENST00000497682 407 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 SCARNA5-201ENST00000516201 276 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 PTK2-220ENST00000520151 573 ntTSL 4 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC093524.1-201ENST00000564266 1094 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 PLEKHA3P1-201ENST00000598554 894 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 QTRT1P1-201ENST00000604344 1078 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC073114.1-201ENST00000612027 490 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC025588.4-201ENST00000615802 908 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 AC018755.4-201ENST00000619715 454 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 OR8G3P-202ENST00000641572 1255 ntBASIC7.52□□□□□ -1.21
SYNGAP1Q96PV0 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
SYNGAP1Q96PV0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms