Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AL512504.1-201ENST00000415494 778 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 NPM1P26-201ENST00000426339 738 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 LINC00328-2P-201ENST00000436585 219 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC016027.4-201ENST00000450866 277 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 SDC4P-201ENST00000453285 601 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 CBX1P2-201ENST00000453841 458 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC099670.1-201ENST00000455141 783 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 ZNF519P4-201ENST00000514008 125 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 RNA5SP230-201ENST00000517039 122 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 OR7E10P-201ENST00000526420 991 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AL121594.2-201ENST00000541658 472 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 MIR4660-201ENST00000583549 74 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 BX322635.1-201ENST00000605804 496 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 MIR6823-201ENST00000622118 61 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 Z95331.1-201ENST00000623075 23112 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
RFT1Q96AA3 AL356317.1-201ENST00000396110 1436 ntBASIC5.14□□□□□ -1.59
RFT1Q96AA3 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
RFT1Q96AA3 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 PCAT14-202ENST00000627127 3935 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 TXN-201ENST00000374515 635 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 OOSP1-201ENST00000398992 1270 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 DSTNP5-201ENST00000427921 523 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 MTCO1P57-201ENST00000432182 261 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 RPL12P49-201ENST00000441100 121 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 RPL31P20-201ENST00000449593 360 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 ABCC13-202ENST00000463099 3842 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 RPS7P10-201ENST00000464254 603 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 HMGN1P16-201ENST00000508308 283 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 IGKV1OR22-1-201ENST00000521497 360 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 OR10D4P-201ENST00000525892 951 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 MIR3157-201ENST00000578688 85 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 AP005262.1-201ENST00000582646 997 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 AC119403.2-201ENST00000590960 598 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 AC073333.2-201ENST00000603589 769 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 AC012213.4-201ENST00000606457 354 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
RFT1Q96AA3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.13□□□□□ -1.59
RFT1Q96AA3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.13□□□□□ -1.59
RFT1Q96AA3 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms