Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 ZNF658B-201ENST00000602828 3408 ntBASIC6.4□□□□□ -1.39
HMGCS2P54868 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
HMGCS2P54868 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
HMGCS2P54868 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
HMGCS2P54868 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.4□□□□□ -1.39
HMGCS2P54868 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
HMGCS2P54868 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGCS2P54868 ZNF969P-201ENST00000510345 2341 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
HMGCS2P54868 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGCS2P54868 AL589993.1-201ENST00000407450 2524 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
HMGCS2P54868 RNA5SP326-201ENST00000363209 110 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGCS2P54868 TRAJ35-201ENST00000390502 59 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HMGCS2P54868 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGCS2P54868 VN1R54P-201ENST00000435210 1049 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 AL596266.1-201ENST00000448132 400 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 AL512328.1-202ENST00000452640 850 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGCS2P54868 AC115223.1-201ENST00000466377 870 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 SNRPCP2-201ENST00000504370 475 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 RNU6ATAC24P-201ENST00000516811 135 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGCS2P54868 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.39□□□□□ -1.39
HMGCS2P54868 AL163952.1-202ENST00000569625 600 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC6.39□□□□□ -1.39
HMGCS2P54868 AC069307.1-201ENST00000602820 447 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 NANOGP3-201ENST00000605855 286 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 AC009163.6-201ENST00000612367 342 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 MAPK10-350ENST00000641777 965 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 AC144833.1-201ENST00000567953 4089 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGCS2P54868 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.39□□□□□ -1.39
HMGCS2P54868 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
HMGCS2P54868 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGCS2P54868 AC068733.2-201ENST00000605434 1418 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 AC068870.1-201ENST00000563737 2455 ntBASIC6.39□□□□□ -1.39
HMGCS2P54868 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
HMGCS2P54868 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
HMGCS2P54868 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
HMGCS2P54868 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 AC011504.1-201ENST00000623331 4103 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HMGCS2P54868 RNU6ATAC21P-201ENST00000408656 126 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 AC096921.1-201ENST00000411661 375 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 RBMY2KP-201ENST00000418221 992 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGCS2P54868 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGCS2P54868 GSTM5P1-201ENST00000434751 660 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGCS2P54868 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGCS2P54868 AC073850.1-201ENST00000449243 255 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 SLC25A51P1-201ENST00000468432 871 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 AC015864.1-201ENST00000496512 544 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 NDUFB5P1-201ENST00000508134 564 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 AC110775.1-201ENST00000513721 462 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGCS2P54868 SCARNA16.4-201ENST00000516956 187 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 PMS2P3-207ENST00000529061 717 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
HMGCS2P54868 AC127381.1-201ENST00000555979 939 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGCS2P54868 AP005403.1-201ENST00000579720 229 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 AC060766.1-201ENST00000590824 627 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGCS2P54868 HIRAP1-201ENST00000605318 787 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 AL133481.2-203ENST00000607558 139 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.38□□□□□ -1.39
HMGCS2P54868 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.38□□□□□ -1.39
HMGCS2P54868 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC6.38□□□□□ -1.39
HMGCS2P54868 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 AC110716.2-201ENST00000563865 3945 ntBASIC6.38□□□□□ -1.39
HMGCS2P54868 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
HMGCS2P54868 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGCS2P54868 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGCS2P54868 EPS15P1-202ENST00000459691 2071 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HMGCS2P54868 ZNF101P1-201ENST00000435701 1720 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC6.37□□□□□ -1.39
HMGCS2P54868 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
HMGCS2P54868 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
HMGCS2P54868 RNA5SP305-201ENST00000362665 119 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 AL109941.1-201ENST00000401925 229 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 OR4K12P-201ENST00000406538 961 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 RPL37P18-201ENST00000411602 243 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 AC010740.1-201ENST00000417035 684 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 HNRNPA3P4-201ENST00000427514 803 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 AL772161.1-201ENST00000439130 476 ntBASIC6.37□□□□□ -1.39
HMGCS2P54868 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms