Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CR1P49238 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 TCP11X1-202ENST00000622971 1372 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CR1P49238 RNA5SP273-201ENST00000362484 113 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 RNA5SP477-201ENST00000362639 119 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 RNA5SP326-201ENST00000363209 110 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 AC005042.1-201ENST00000393397 800 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CR1P49238 HMGN2P27-201ENST00000427352 270 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 AC069154.1-201ENST00000432914 542 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 RPS23P9-201ENST00000448848 438 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 CBX1P2-201ENST00000453841 458 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 YRDCP3-201ENST00000456507 480 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 RPL12P24-201ENST00000474907 486 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 AC025458.1-201ENST00000506046 166 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 SCARNA6.1-201ENST00000516989 238 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.96□□□□□ -1.62
CX3CR1P49238 NELL2-211ENST00000548826 559 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC4.96□□□□□ -1.62
CX3CR1P49238 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.96□□□□□ -1.62
CX3CR1P49238 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
CX3CR1P49238 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 HSPD1P7-201ENST00000447985 1686 ntBASIC4.96□□□□□ -1.62
CX3CR1P49238 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.96□□□□□ -1.62
CX3CR1P49238 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
CX3CR1P49238 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CX3CR1P49238 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 Z83820.1-201ENST00000456978 1499 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CX3CR1P49238 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 AL159987.1-201ENST00000347911 293 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CX3CR1P49238 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 RPS6P23-201ENST00000413224 722 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 AC234781.4-201ENST00000419384 244 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.95□□□□□ -1.62
CX3CR1P49238 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC4.95□□□□□ -1.62
CX3CR1P49238 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC4.95□□□□□ -1.62
CX3CR1P49238 PCBP2P1-201ENST00000437262 977 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC4.95□□□□□ -1.62
CX3CR1P49238 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC4.95□□□□□ -1.62
CX3CR1P49238 ACA64.1-201ENST00000459171 127 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 SNORD125-201ENST00000459538 96 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 AP002884.1-201ENST00000479691 655 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 AC073610.1-201ENST00000489971 396 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 RPSAP51-201ENST00000497462 645 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
CX3CR1P49238 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CR1P49238 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC4.95□□□□□ -1.62
CX3CR1P49238 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.95□□□□□ -1.62
CX3CR1P49238 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.95□□□□□ -1.62
CX3CR1P49238 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 MIR6133-201ENST00000617057 108 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
CX3CR1P49238 AC022919.1-201ENST00000624979 626 ntBASIC4.95□□□□□ -1.62
CX3CR1P49238 AC009950.2-201ENST00000636548 183 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms