Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 HMGB1P32-201ENST00000425971 565 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 MTCYBP15-201ENST00000433123 1127 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 BX679664.2-201ENST00000439282 283 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 PPIAP20-201ENST00000449839 135 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 AC006539.1-201ENST00000481419 501 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AC091544.1-201ENST00000484702 348 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AC021678.3-201ENST00000517893 476 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.87□□□□□ -1.47
SMAD6O43541 AL731537.2-201ENST00000561565 951 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AC096996.1-201ENST00000563813 325 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 MTND4LP25-201ENST00000570218 163 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AC090286.3-201ENST00000573133 187 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AP001496.3-201ENST00000580230 913 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 RNA5SP440-201ENST00000612665 119 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
SMAD6O43541 AC138627.1-204ENST00000641894 765 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 MFSD8-239ENST00000641590 2479 ntBASIC5.87□□□□□ -1.47
SMAD6O43541 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
SMAD6O43541 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
SMAD6O43541 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.87□□□□□ -1.47
SMAD6O43541 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 AC024341.1-201ENST00000526444 1552 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.86□□□□□ -1.47
SMAD6O43541 AC011503.2-201ENST00000594230 1500 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.86□□□□□ -1.47
SMAD6O43541 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 SNORA64.1-201ENST00000362600 132 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 RPL23AP17-201ENST00000401064 499 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 CHEK2P5-201ENST00000423877 246 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 AL390879.2-203ENST00000426943 1121 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 RPS3AP38-201ENST00000435889 763 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SMAD6O43541 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.86□□□□□ -1.47
SMAD6O43541 AC096775.1-201ENST00000437724 448 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
SMAD6O43541 FRG2FP-204ENST00000453982 852 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 OSTCP1-201ENST00000455507 450 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 RN7SL174P-201ENST00000475578 289 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC5.86□□□□□ -1.47
SMAD6O43541 AC110760.3-202ENST00000515177 371 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 SNORA43.3-201ENST00000517240 103 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 AC078899.1-201ENST00000521432 1185 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 HMGB1P42-201ENST00000532126 553 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC5.86□□□□□ -1.47
SMAD6O43541 AC245128.3-201ENST00000594721 748 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.86□□□□□ -1.47
SMAD6O43541 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.86□□□□□ -1.47
SMAD6O43541 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 AL451064.1-201ENST00000607718 471 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.86□□□□□ -1.47
SMAD6O43541 AL355480.1-201ENST00000629041 99 ntBASIC5.86□□□□□ -1.47
SMAD6O43541 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
SMAD6O43541 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.86□□□□□ -1.47
SMAD6O43541 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
SMAD6O43541 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
SMAD6O43541 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.86□□□□□ -1.47
SMAD6O43541 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.86□□□□□ -1.47
SMAD6O43541 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
SMAD6O43541 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
SMAD6O43541 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 119.1 ms