Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM38O00635 MARK2P12-201ENST00000420129 585 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM38O00635 AC093084.1-201ENST00000424233 687 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AL390879.1-201ENST00000439143 386 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM38O00635 AL445687.2-201ENST00000458156 728 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 snoU13.29-201ENST00000459370 104 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM38O00635 AC108729.2-201ENST00000476543 840 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 RN7SL326P-201ENST00000477493 296 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC016550.1-201ENST00000505348 785 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM38O00635 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.15□□□□□ -1.42
TRIM38O00635 OR5H7P-201ENST00000514084 930 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM38O00635 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.15□□□□□ -1.42
TRIM38O00635 NOP56P3-201ENST00000549457 385 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC068305.2-201ENST00000550567 1205 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM38O00635 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.15□□□□□ -1.42
TRIM38O00635 AC068768.2-201ENST00000602352 343 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AL158050.2-201ENST00000605336 568 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.15□□□□□ -1.42
TRIM38O00635 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.15□□□□□ -1.42
TRIM38O00635 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
TRIM38O00635 RFPL4AP6-201ENST00000616792 846 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC022079.1-201ENST00000621546 602 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC097460.3-201ENST00000623099 442 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC129778.1-202ENST00000623812 261 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC103703.1-201ENST00000634783 663 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AL591379.1-207ENST00000635982 261 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 AC092692.1-201ENST00000623625 2595 ntBASIC6.15□□□□□ -1.42
TRIM38O00635 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TRIM38O00635 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM38O00635 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM38O00635 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.15□□□□□ -1.43
TRIM38O00635 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM38O00635 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
TRIM38O00635 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC6.15□□□□□ -1.43
TRIM38O00635 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
TRIM38O00635 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.15□□□□□ -1.43
TRIM38O00635 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
TRIM38O00635 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM38O00635 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
TRIM38O00635 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 RAD1P1-201ENST00000231383 813 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TRIM38O00635 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
TRIM38O00635 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 SNORA51.1-201ENST00000363243 140 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 RNA5SP478-201ENST00000364657 115 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 RN7SKP81-201ENST00000365603 331 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 RN7SKP121-201ENST00000410842 305 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.14□□□□□ -1.43
TRIM38O00635 MTCYBP7-201ENST00000419540 1134 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 MTCYBP29-201ENST00000436327 1006 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 Z84478.1-201ENST00000438230 1219 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM38O00635 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC092967.1-201ENST00000449016 481 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 AP000547.1-201ENST00000454360 617 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 CST12P-201ENST00000457644 362 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 UCK2-205ENST00000469256 753 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6.14□□□□□ -1.43
TRIM38O00635 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC093763.2-201ENST00000505334 1223 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
TRIM38O00635 PRMT5P1-201ENST00000514351 598 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 IGHVIII-47-1-201ENST00000518187 331 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC022826.1-201ENST00000519383 805 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 SNORD39.2-201ENST00000579995 76 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC6.14□□□□□ -1.43
TRIM38O00635 FAM106CP-201ENST00000582212 507 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.14□□□□□ -1.43
TRIM38O00635 BX323046.1-201ENST00000610145 535 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 AC009039.2-201ENST00000624524 529 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 CDC27P2-201ENST00000425026 1922 ntBASIC6.14□□□□□ -1.43
TRIM38O00635 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms