Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 RPS3P2-201ENST00000421346 701 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 Z84478.1-201ENST00000438230 1219 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 EEF1B2P6-201ENST00000445713 673 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 IGBP1P4-201ENST00000503202 879 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 AC138866.2-201ENST00000508650 584 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 SNORD46.2-201ENST00000516021 102 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 AC079600.1-201ENST00000550326 297 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 IGBP1P1-201ENST00000554337 1009 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 MIR7853-201ENST00000584820 132 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 AP001029.2-203ENST00000589795 4910 ntBASIC5.91□□□□□ -1.46
SIX2Q9NPC8 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.91□□□□□ -1.46
SIX2Q9NPC8 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 Z83820.1-201ENST00000456978 1499 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 GAPDHP42-201ENST00000406848 981 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 BX119321.1-201ENST00000428912 797 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC073109.1-201ENST00000445066 978 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AL450996.1-201ENST00000445574 1202 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC084754.1-201ENST00000463466 464 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 CYCSP22-201ENST00000517555 339 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AC012616.1-201ENST00000600294 197 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AL356608.1-201ENST00000610034 820 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AP003072.5-201ENST00000623872 773 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 CU639417.4-201ENST00000623928 207 ntBASIC5.9□□□□□ -1.46
SIX2Q9NPC8 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SIX2Q9NPC8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 VEZF1-204ENST00000584396 2342 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.47
SIX2Q9NPC8 AP002512.4-202ENST00000641599 4530 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 FGG-201ENST00000336098 1659 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 RNA5SP46-201ENST00000362370 120 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 RN7SKP6-201ENST00000364795 319 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 FIG4-202ENST00000368941 791 ntTSL 3 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 RNU6-167P-201ENST00000384292 106 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 DBIP1-201ENST00000401435 260 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 EEF1B2P8-201ENST00000414101 671 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC009506.2-201ENST00000420635 840 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 IPPKP1-201ENST00000422501 768 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC090804.1-201ENST00000448870 490 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC108751.3-201ENST00000461814 1020 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 PSAT1P4-201ENST00000466500 526 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.89□□□□□ -1.47
SIX2Q9NPC8 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 RN7SKP70-201ENST00000516655 271 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC022826.1-201ENST00000519383 805 ntBASIC5.89□□□□□ -1.47
SIX2Q9NPC8 AC008676.3-201ENST00000521237 435 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms