Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 OR4A17P-201ENST00000526032 904 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 OR5AM1P-201ENST00000532136 1032 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 IGBP1P1-201ENST00000554337 1009 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AC008521.2-201ENST00000591021 259 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AC107993.1-201ENST00000591343 684 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AP001284.1-201ENST00000528393 2118 ntBASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.29□□□□□ -1.4
CCSER1Q9C0I3 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC087516.1-201ENST00000561236 2428 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 SERPINA7P1-201ENST00000443077 631 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC023271.1-201ENST00000445936 1090 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 RN7SL188P-201ENST00000469842 285 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 OARD1-211ENST00000480585 829 ntTSL 3 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 RN7SL273P-201ENST00000481561 299 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 SNORA43.3-201ENST00000517240 103 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC125494.2-201ENST00000602431 657 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AL139124.1-201ENST00000609123 421 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC127024.6-201ENST00000621598 424 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC026124.2-201ENST00000621847 656 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AL390318.1-201ENST00000624564 687 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC103703.1-201ENST00000634783 663 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 MIR193BHG-214ENST00000641765 509 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 ZNF280B-201ENST00000613655 3714 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC007938.2-201ENST00000604666 2634 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 AC015799.1-201ENST00000622996 3122 ntBASIC6.28□□□□□ -1.4
CCSER1Q9C0I3 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AP002512.4-202ENST00000641599 4530 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 RNA5SP435-201ENST00000364044 108 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 RNA5SP122-201ENST00000384457 108 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 NAP1L4P2-201ENST00000425958 899 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AL662874.1-201ENST00000426065 230 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 REG1CP-206ENST00000447469 496 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 RPL31P15-201ENST00000449770 338 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 RPL7P51-201ENST00000490532 749 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AC021106.1-201ENST00000509020 1058 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 HMGN2P47-201ENST00000559378 272 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AC023389.2-201ENST00000580031 955 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 MIR6133-201ENST00000617057 108 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 AL512356.3-201ENST00000623005 461 ntBASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 IPO5-229ENST00000631030 192 ntTSL 5 BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
CCSER1Q9C0I3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms