Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 RN7SL273P-201ENST00000481561 299 ntBASIC5.87□□□□□ -1.47
RPRD1AQ96P16 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AC027544.3-201ENST00000535082 757 ntBASIC5.87□□□□□ -1.47
RPRD1AQ96P16 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AC126615.2-201ENST00000553003 515 ntBASIC5.87□□□□□ -1.47
RPRD1AQ96P16 NPM1P5-201ENST00000557228 838 ntBASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
RPRD1AQ96P16 AC026523.2-201ENST00000625039 7739 ntBASIC5.87□□□□□ -1.47
RPRD1AQ96P16 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 PROS2P-201ENST00000474651 1951 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 RNA5SP30-201ENST00000365552 115 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC087752.1-201ENST00000391360 558 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 NENFP1-201ENST00000419476 466 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC009506.2-201ENST00000420635 840 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC113412.1-201ENST00000425840 504 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 RPL12P16-201ENST00000431098 498 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AL391987.1-201ENST00000441025 200 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC138866.2-201ENST00000508650 584 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 TMEM97P2-201ENST00000517841 403 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 MAL2-207ENST00000522828 603 ntTSL 3 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AL049872.1-201ENST00000556323 322 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC012146.2-201ENST00000576545 416 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 MIR4505-201ENST00000582238 73 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC010487.1-201ENST00000594408 1172 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC018809.2-201ENST00000602436 3823 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 HIRAP1-201ENST00000605318 787 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 NANOGP3-201ENST00000605855 286 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 RNA5SP440-201ENST00000612665 119 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 AC008115.3-201ENST00000614874 549 ntBASIC5.86□□□□□ -1.47
RPRD1AQ96P16 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
RPRD1AQ96P16 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 YES1P1-201ENST00000418510 1628 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 AC114786.1-201ENST00000512892 1415 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 BCORP1-203ENST00000513194 5093 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 MIR323A-201ENST00000362199 86 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 RANP7-201ENST00000418085 644 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 NAP1L4P2-201ENST00000425958 899 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 AC114982.2-201ENST00000461396 358 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
RPRD1AQ96P16 RPS7P6-201ENST00000485777 579 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 NPM1P28-201ENST00000492269 840 ntBASIC5.85□□□□□ -1.47
RPRD1AQ96P16 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms