Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 RNU6-650P-201ENST00000365658 111 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AL356968.2-201ENST00000412769 1257 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 PSMA3-202ENST00000412908 908 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 RPL12P12-201ENST00000424633 501 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 BX276092.6-201ENST00000430476 250 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC245291.3-201ENST00000443400 292 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 BUD31P2-201ENST00000449374 300 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 BX276092.8-201ENST00000455722 250 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 CTSLP6-201ENST00000458273 1002 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC079080.1-201ENST00000479841 822 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC083795.1-201ENST00000491760 320 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 OR9N1P-202ENST00000494289 481 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AL035458.2-201ENST00000512005 478 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 NPM1P21-201ENST00000513394 762 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 RNA5SP434-201ENST00000516647 121 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC078899.1-201ENST00000521432 1185 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 IGHVIII-11-1-201ENST00000522733 267 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC007346.2-201ENST00000564816 892 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 LINC02520-201ENST00000570443 537 ntTSL 4 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC063977.7-201ENST00000594454 337 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC006115.2-201ENST00000596823 202 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 RPAP2P1-201ENST00000603626 1168 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 MKKS-203ENST00000609375 882 ntTSL 2 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 AP000943.4-201ENST00000622912 357 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC099654.15-201ENST00000639802 509 ntBASIC5.34□□□□□ -1.55
SHFQ7M4L6 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
SHFQ7M4L6 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
SHFQ7M4L6 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.34□□□□□ -1.56
SHFQ7M4L6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SHFQ7M4L6 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SHFQ7M4L6 BCORP1-203ENST00000513194 5093 ntBASIC5.34□□□□□ -1.56
SHFQ7M4L6 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
SHFQ7M4L6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 TCP11X1-202ENST00000622971 1372 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 RNU6-792P-201ENST00000363490 107 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 RN7SKP257-201ENST00000364525 309 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 RNA5SP77-201ENST00000365394 120 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 SNORA5.1-201ENST00000384275 131 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 PSMA6P1-201ENST00000400275 741 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AL096829.1-201ENST00000413677 457 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 METTL15P3-201ENST00000415522 1221 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 RPL35AP31-201ENST00000418340 337 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AL606490.7-201ENST00000433136 191 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC006326.1-201ENST00000445465 787 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC234771.2-201ENST00000445718 597 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 ZNF619P1-201ENST00000446539 752 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 CCRL1P1-201ENST00000449542 1053 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 PPIAP32-201ENST00000449940 472 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.33□□□□□ -1.56
SHFQ7M4L6 FRG2FP-204ENST00000453982 852 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC104629.2-201ENST00000468627 598 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 RPL38P3-201ENST00000484463 213 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC015864.1-201ENST00000496512 544 ntBASIC5.33□□□□□ -1.56
SHFQ7M4L6 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
SHFQ7M4L6 AC093801.2-201ENST00000503966 1050 ntBASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 115.4 ms