Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.47□□□□□ -1.53
PKNOX1P55347 OR5AM1P-201ENST00000532136 1032 ntBASIC5.47□□□□□ -1.53
PKNOX1P55347 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.47□□□□□ -1.53
PKNOX1P55347 AL359219.2-201ENST00000555184 348 ntBASIC5.47□□□□□ -1.53
PKNOX1P55347 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.47□□□□□ -1.53
PKNOX1P55347 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.47□□□□□ -1.53
PKNOX1P55347 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.47□□□□□ -1.53
PKNOX1P55347 H3F3BP2-201ENST00000583907 357 ntBASIC5.47□□□□□ -1.53
PKNOX1P55347 AC107993.1-201ENST00000591343 684 ntBASIC5.47□□□□□ -1.53
PKNOX1P55347 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.47□□□□□ -1.53
PKNOX1P55347 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.47□□□□□ -1.53
PKNOX1P55347 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKNOX1P55347 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
PKNOX1P55347 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKNOX1P55347 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.47□□□□□ -1.53
PKNOX1P55347 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
PKNOX1P55347 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.47□□□□□ -1.53
PKNOX1P55347 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
PKNOX1P55347 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.47□□□□□ -1.53
PKNOX1P55347 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.53
PKNOX1P55347 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.53
PKNOX1P55347 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.53
PKNOX1P55347 PWAR1-201ENST00000624188 2414 ntBASIC5.46□□□□□ -1.53
PKNOX1P55347 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.46□□□□□ -1.54
PKNOX1P55347 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PKNOX1P55347 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PKNOX1P55347 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.46□□□□□ -1.54
PKNOX1P55347 RN7SKP171-201ENST00000364417 303 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 NACAP7-201ENST00000407371 609 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 RANP7-201ENST00000418085 644 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 NENFP1-201ENST00000419476 466 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC007679.3-201ENST00000434035 414 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 NDUFB4P8-201ENST00000435351 367 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 NDUFS5P5-201ENST00000437256 321 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 IGBP1P3-201ENST00000447449 1000 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC122718.2-201ENST00000505325 591 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 SNORA70.11-201ENST00000515987 138 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 SNORA70.13-201ENST00000516116 138 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 SEPT10P1-201ENST00000517342 1162 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC5.46□□□□□ -1.54
PKNOX1P55347 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC079905.1-201ENST00000549280 475 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 AC026826.3-201ENST00000561747 158 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PKNOX1P55347 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
PKNOX1P55347 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.46□□□□□ -1.54
PKNOX1P55347 MIR7853-201ENST00000584820 132 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 MIR6806-201ENST00000622141 64 ntBASIC5.46□□□□□ -1.54
PKNOX1P55347 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC5.46□□□□□ -1.54
PKNOX1P55347 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.46□□□□□ -1.54
PKNOX1P55347 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC5.46□□□□□ -1.54
PKNOX1P55347 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.46□□□□□ -1.54
PKNOX1P55347 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
PKNOX1P55347 AL360270.2-201ENST00000562952 5985 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.45□□□□□ -1.54
PKNOX1P55347 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.45□□□□□ -1.54
PKNOX1P55347 AC010266.2-201ENST00000564741 3255 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
PKNOX1P55347 GAPDHP24-201ENST00000328713 983 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 RNA5SP273-201ENST00000362484 113 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 RNU1-150P-201ENST00000362491 162 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
PKNOX1P55347 RPS6P23-201ENST00000413224 722 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 AL022331.1-201ENST00000429025 477 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.45□□□□□ -1.54
PKNOX1P55347 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.45□□□□□ -1.54
PKNOX1P55347 AMYP1-201ENST00000440059 1023 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 AC073465.2-201ENST00000440938 498 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.45□□□□□ -1.54
PKNOX1P55347 DUTP7-201ENST00000507982 486 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 ANAPC10-213ENST00000512680 505 ntTSL 3 BASIC5.45□□□□□ -1.54
PKNOX1P55347 IGLV3-24-201ENST00000517477 197 ntBASIC5.45□□□□□ -1.54
PKNOX1P55347 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC5.45□□□□□ -1.54
PKNOX1P55347 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.45□□□□□ -1.54
PKNOX1P55347 LYRM1-208ENST00000567954 460 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms