Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.99□□□□□ -1.45
LHX1P48742 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.99□□□□□ -1.45
LHX1P48742 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.99□□□□□ -1.45
LHX1P48742 FCF1P7-201ENST00000451185 558 ntBASIC5.99□□□□□ -1.45
LHX1P48742 AC018638.3-201ENST00000461273 132 ntBASIC5.99□□□□□ -1.45
LHX1P48742 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.99□□□□□ -1.45
LHX1P48742 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.99□□□□□ -1.45
LHX1P48742 IGLV3-24-201ENST00000517477 197 ntBASIC5.99□□□□□ -1.45
LHX1P48742 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
LHX1P48742 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.99□□□□□ -1.45
LHX1P48742 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC5.99□□□□□ -1.45
LHX1P48742 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.99□□□□□ -1.45
LHX1P48742 DHFRP1-201ENST00000579682 559 ntBASIC5.99□□□□□ -1.45
LHX1P48742 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.99□□□□□ -1.45
LHX1P48742 AP001267.4-201ENST00000602598 545 ntBASIC5.99□□□□□ -1.45
LHX1P48742 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
LHX1P48742 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.99□□□□□ -1.45
LHX1P48742 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
LHX1P48742 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
LHX1P48742 SAMMSON-210ENST00000641260 1308 ntBASIC5.99□□□□□ -1.45
LHX1P48742 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
LHX1P48742 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.98□□□□□ -1.45
LHX1P48742 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.98□□□□□ -1.45
LHX1P48742 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 CASC19-248ENST00000641674 1356 ntBASIC5.98□□□□□ -1.45
LHX1P48742 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.98□□□□□ -1.45
LHX1P48742 SNORA51.1-201ENST00000363243 140 ntBASIC5.98□□□□□ -1.45
LHX1P48742 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.98□□□□□ -1.45
LHX1P48742 MIR551A-201ENST00000385042 96 ntBASIC5.98□□□□□ -1.45
LHX1P48742 AL009179.1-201ENST00000406085 265 ntBASIC5.98□□□□□ -1.45
LHX1P48742 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.98□□□□□ -1.45
LHX1P48742 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.98□□□□□ -1.45
LHX1P48742 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.98□□□□□ -1.45
LHX1P48742 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.98□□□□□ -1.45
LHX1P48742 TMEM183AP1-205ENST00000432739 290 ntBASIC5.98□□□□□ -1.45
LHX1P48742 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 PPP1R11P1-201ENST00000486095 376 ntBASIC5.98□□□□□ -1.45
LHX1P48742 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.98□□□□□ -1.45
LHX1P48742 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.98□□□□□ -1.45
LHX1P48742 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.98□□□□□ -1.45
LHX1P48742 AC021146.10-201ENST00000515628 706 ntBASIC5.98□□□□□ -1.45
LHX1P48742 RNA5SP362-201ENST00000516048 118 ntBASIC5.98□□□□□ -1.45
LHX1P48742 AP003080.1-202ENST00000526526 915 ntBASIC5.98□□□□□ -1.45
LHX1P48742 PMS2P3-207ENST00000529061 717 ntBASIC5.98□□□□□ -1.45
LHX1P48742 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC5.98□□□□□ -1.45
LHX1P48742 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 AC060780.2-201ENST00000589047 198 ntBASIC5.98□□□□□ -1.45
LHX1P48742 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.98□□□□□ -1.45
LHX1P48742 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.98□□□□□ -1.45
LHX1P48742 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
LHX1P48742 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 AC034229.2-201ENST00000566945 2508 ntBASIC5.98□□□□□ -1.45
LHX1P48742 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
LHX1P48742 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
LHX1P48742 MTCO1P11-201ENST00000429111 1528 ntBASIC5.98□□□□□ -1.45
LHX1P48742 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.98□□□□□ -1.45
LHX1P48742 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
LHX1P48742 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LHX1P48742 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.97□□□□□ -1.45
LHX1P48742 GAPDHP24-201ENST00000328713 983 ntBASIC5.97□□□□□ -1.45
LHX1P48742 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LHX1P48742 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
LHX1P48742 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.97□□□□□ -1.45
LHX1P48742 RPS20P25-201ENST00000412447 352 ntBASIC5.97□□□□□ -1.45
LHX1P48742 METTL15P3-201ENST00000415522 1221 ntBASIC5.97□□□□□ -1.45
LHX1P48742 RPL23AP18-201ENST00000416139 468 ntBASIC5.97□□□□□ -1.45
LHX1P48742 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
LHX1P48742 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 AC092651.1-201ENST00000426110 312 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 AL390119.1-201ENST00000440329 312 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AL596266.1-201ENST00000448132 400 ntBASIC5.97□□□□□ -1.45
LHX1P48742 VDAC2P4-201ENST00000452925 711 ntBASIC5.97□□□□□ -1.45
LHX1P48742 RNU7-157P-201ENST00000459600 66 ntBASIC5.97□□□□□ -1.45
LHX1P48742 ATP5LP5-201ENST00000483050 299 ntBASIC5.97□□□□□ -1.45
LHX1P48742 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.97□□□□□ -1.45
LHX1P48742 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.97□□□□□ -1.45
LHX1P48742 ATP5LP3-201ENST00000514223 304 ntBASIC5.97□□□□□ -1.45
LHX1P48742 RN7SKP5-201ENST00000517045 272 ntBASIC5.97□□□□□ -1.45
LHX1P48742 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms