Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 RPL7P6-201ENST00000480903 738 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CXCL12P48061 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC5.61□□□□□ -1.51
CXCL12P48061 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.61□□□□□ -1.51
CXCL12P48061 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 OR8G3P-201ENST00000533406 921 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 AC092821.2-201ENST00000545710 2042 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 DPPA3P2-202ENST00000557188 1219 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.61□□□□□ -1.51
CXCL12P48061 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.61□□□□□ -1.51
CXCL12P48061 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CXCL12P48061 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CXCL12P48061 MIR4311-201ENST00000580794 100 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 MIR4480-201ENST00000582492 71 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.61□□□□□ -1.51
CXCL12P48061 AC079414.3-201ENST00000612986 1090 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 AC025574.2-201ENST00000615621 514 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.61□□□□□ -1.51
CXCL12P48061 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CXCL12P48061 MAPK10-365ENST00000641902 3825 ntBASIC5.61□□□□□ -1.51
CXCL12P48061 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CXCL12P48061 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CXCL12P48061 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 ZNF658B-201ENST00000602828 3408 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
CXCL12P48061 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.6□□□□□ -1.51
CXCL12P48061 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.6□□□□□ -1.51
CXCL12P48061 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
CXCL12P48061 SSX3-202ENST00000376893 800 ntTSL 2 BASIC5.6□□□□□ -1.51
CXCL12P48061 DUTP5-201ENST00000406790 469 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 U3.36-201ENST00000408418 213 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC5.6□□□□□ -1.51
CXCL12P48061 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.6□□□□□ -1.51
CXCL12P48061 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.6□□□□□ -1.51
CXCL12P48061 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC5.6□□□□□ -1.51
CXCL12P48061 RPS29P22-201ENST00000472363 168 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 AC007686.1-201ENST00000488511 463 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 DUTP1-201ENST00000493631 470 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.6□□□□□ -1.51
CXCL12P48061 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC5.6□□□□□ -1.51
CXCL12P48061 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 HMGB1P40-201ENST00000525121 540 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 AGGF1P7-201ENST00000562369 913 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 AC011840.5-201ENST00000582125 771 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.6□□□□□ -1.51
CXCL12P48061 ELOCP28-201ENST00000590044 317 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 AC060766.1-201ENST00000590824 627 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 LINC01739-205ENST00000641890 573 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 AL121768.1-201ENST00000613917 2544 ntBASIC5.6□□□□□ -1.51
CXCL12P48061 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
CXCL12P48061 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
CXCL12P48061 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.6□□□□□ -1.51
CXCL12P48061 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.59□□□□□ -1.51
CXCL12P48061 PWAR1-201ENST00000624188 2414 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.59□□□□□ -1.51
CXCL12P48061 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 CDY5P-201ENST00000411487 1580 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 CDY9P-201ENST00000451397 1580 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CXCL12P48061 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
CXCL12P48061 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC5.59□□□□□ -1.51
CXCL12P48061 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.59□□□□□ -1.51
CXCL12P48061 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
CXCL12P48061 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
CXCL12P48061 AL360271.1-201ENST00000395679 510 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.59□□□□□ -1.51
CXCL12P48061 AC093655.2-201ENST00000425735 631 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
CXCL12P48061 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.59□□□□□ -1.51
CXCL12P48061 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC5.59□□□□□ -1.51
CXCL12P48061 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.59□□□□□ -1.51
CXCL12P48061 RPS11P7-201ENST00000442125 465 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC5.59□□□□□ -1.51
CXCL12P48061 MEMO1P4-201ENST00000453590 386 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 HNRNPDLP2-201ENST00000455248 751 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.59□□□□□ -1.51
CXCL12P48061 AC002075.1-201ENST00000457396 676 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 GYG1P1-201ENST00000460864 698 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 CEACAMP10-202ENST00000495431 496 ntBASIC5.59□□□□□ -1.51
CXCL12P48061 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.59□□□□□ -1.51
CXCL12P48061 AC090424.1-201ENST00000535243 736 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms