Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.06□□□□□ -1.6
APOC1P02654 AC018797.1-201ENST00000510791 255 ntBASIC5.06□□□□□ -1.6
APOC1P02654 AL845552.1-201ENST00000556820 323 ntBASIC5.06□□□□□ -1.6
APOC1P02654 AC091078.2-201ENST00000557145 559 ntBASIC5.06□□□□□ -1.6
APOC1P02654 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC5.06□□□□□ -1.6
APOC1P02654 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.06□□□□□ -1.6
APOC1P02654 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC5.06□□□□□ -1.6
APOC1P02654 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.06□□□□□ -1.6
APOC1P02654 MIR4776-2-201ENST00000580204 80 ntBASIC5.06□□□□□ -1.6
APOC1P02654 MIR3936-201ENST00000584304 110 ntBASIC5.06□□□□□ -1.6
APOC1P02654 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
APOC1P02654 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.06□□□□□ -1.6
APOC1P02654 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.06□□□□□ -1.6
APOC1P02654 AC124916.2-201ENST00000604416 224 ntBASIC5.06□□□□□ -1.6
APOC1P02654 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.06□□□□□ -1.6
APOC1P02654 MIR6793-201ENST00000612376 63 ntBASIC5.06□□□□□ -1.6
APOC1P02654 AL136228.1-201ENST00000622221 319 ntBASIC5.06□□□□□ -1.6
APOC1P02654 AC111152.1-202ENST00000635848 339 ntBASIC5.06□□□□□ -1.6
APOC1P02654 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.06□□□□□ -1.6
APOC1P02654 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
APOC1P02654 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC5.06□□□□□ -1.6
APOC1P02654 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
APOC1P02654 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
APOC1P02654 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
APOC1P02654 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.06□□□□□ -1.6
APOC1P02654 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC5.06□□□□□ -1.6
APOC1P02654 AC104966.1-201ENST00000467010 1464 ntBASIC5.06□□□□□ -1.6
APOC1P02654 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
APOC1P02654 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
APOC1P02654 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
APOC1P02654 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
APOC1P02654 AL360270.2-201ENST00000562952 5985 ntBASIC5.06□□□□□ -1.6
APOC1P02654 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
APOC1P02654 PDZK1P1-202ENST00000425209 1350 ntBASIC5.05□□□□□ -1.6
APOC1P02654 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 AC092681.1-201ENST00000297369 291 ntBASIC5.05□□□□□ -1.6
APOC1P02654 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 IFNA10-201ENST00000357374 963 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
APOC1P02654 RNU1-146P-201ENST00000364015 165 ntBASIC5.05□□□□□ -1.6
APOC1P02654 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
APOC1P02654 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 RNA5SP91-201ENST00000390902 119 ntBASIC5.05□□□□□ -1.6
APOC1P02654 AC087752.1-201ENST00000391360 558 ntBASIC5.05□□□□□ -1.6
APOC1P02654 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 PNKDP1-201ENST00000435914 430 ntBASIC5.05□□□□□ -1.6
APOC1P02654 SNORD125-201ENST00000459538 96 ntBASIC5.05□□□□□ -1.6
APOC1P02654 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.05□□□□□ -1.6
APOC1P02654 RN7SL57P-201ENST00000493687 290 ntBASIC5.05□□□□□ -1.6
APOC1P02654 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 AC106822.1-201ENST00000502647 526 ntBASIC5.05□□□□□ -1.6
APOC1P02654 AL158068.1-201ENST00000506116 616 ntBASIC5.05□□□□□ -1.6
APOC1P02654 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 AC138207.8-204ENST00000579588 527 ntBASIC5.05□□□□□ -1.6
APOC1P02654 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 AL117336.3-201ENST00000603160 1107 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC5.05□□□□□ -1.6
APOC1P02654 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.05□□□□□ -1.6
APOC1P02654 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 MFSD8-239ENST00000641590 2479 ntBASIC5.05□□□□□ -1.6
APOC1P02654 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.05□□□□□ -1.6
APOC1P02654 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.05□□□□□ -1.6
APOC1P02654 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.05□□□□□ -1.6
APOC1P02654 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOC1P02654 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.04□□□□□ -1.6
APOC1P02654 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.04□□□□□ -1.6
APOC1P02654 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOC1P02654 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.04□□□□□ -1.6
APOC1P02654 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
APOC1P02654 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms