Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 AP000648.1-201ENST00000529682 397 ntBASIC5.54□□□□□ -1.52
NDUFS4O43181 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.54□□□□□ -1.52
NDUFS4O43181 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NDUFS4O43181 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.54□□□□□ -1.52
NDUFS4O43181 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.54□□□□□ -1.52
NDUFS4O43181 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.54□□□□□ -1.52
NDUFS4O43181 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.54□□□□□ -1.52
NDUFS4O43181 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.54□□□□□ -1.52
NDUFS4O43181 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.54□□□□□ -1.52
NDUFS4O43181 MIR4433B-201ENST00000581329 102 ntBASIC5.54□□□□□ -1.52
NDUFS4O43181 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5.54□□□□□ -1.52
NDUFS4O43181 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 RPL12P48-201ENST00000605620 304 ntBASIC5.54□□□□□ -1.52
NDUFS4O43181 AL031601.1-201ENST00000605702 394 ntBASIC5.54□□□□□ -1.52
NDUFS4O43181 AC084036.1-201ENST00000609190 508 ntBASIC5.54□□□□□ -1.52
NDUFS4O43181 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 AL356094.1-201ENST00000624663 1212 ntBASIC5.54□□□□□ -1.52
NDUFS4O43181 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.54□□□□□ -1.52
NDUFS4O43181 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC5.54□□□□□ -1.52
NDUFS4O43181 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.54□□□□□ -1.52
NDUFS4O43181 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
NDUFS4O43181 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NDUFS4O43181 AL161901.1-201ENST00000624954 3425 ntBASIC5.54□□□□□ -1.52
NDUFS4O43181 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC5.54□□□□□ -1.52
NDUFS4O43181 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 NAMPTP1-201ENST00000440465 2514 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
NDUFS4O43181 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 AC117409.1-201ENST00000470499 1310 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.53□□□□□ -1.52
NDUFS4O43181 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 AP002512.4-202ENST00000641599 4530 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.53□□□□□ -1.52
NDUFS4O43181 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NDUFS4O43181 C2orf76-201ENST00000334816 676 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 MIR365B-201ENST00000362317 111 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 RPL11P3-201ENST00000395256 523 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 AL357752.1-201ENST00000412817 349 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 AC245060.4-201ENST00000413293 1121 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 CDY17P-201ENST00000414121 1282 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.53□□□□□ -1.52
NDUFS4O43181 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.53□□□□□ -1.52
NDUFS4O43181 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.53□□□□□ -1.52
NDUFS4O43181 LDHAP2-201ENST00000437325 985 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 TXNP2-201ENST00000443918 295 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 OR7E116P-201ENST00000448529 957 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 AL122019.1-202ENST00000458070 546 ntTSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 NFU1-207ENST00000462320 558 ntTSL 4 BASIC5.53□□□□□ -1.52
NDUFS4O43181 AC011476.1-201ENST00000466725 307 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 AC022336.1-201ENST00000475510 337 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
NDUFS4O43181 RFPL4AP3-201ENST00000515267 345 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC5.53□□□□□ -1.52
NDUFS4O43181 SNORA70.20-201ENST00000516848 126 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 NANOGNBP2-201ENST00000544753 553 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.53□□□□□ -1.52
NDUFS4O43181 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.53□□□□□ -1.52
NDUFS4O43181 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC5.53□□□□□ -1.52
NDUFS4O43181 AC126615.2-201ENST00000553003 515 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.53□□□□□ -1.52
NDUFS4O43181 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 AC092111.2-201ENST00000611627 1414 ntBASIC5.53□□□□□ -1.52
NDUFS4O43181 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.53□□□□□ -1.52
NDUFS4O43181 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
NDUFS4O43181 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
NDUFS4O43181 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
NDUFS4O43181 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC5.53□□□□□ -1.52
NDUFS4O43181 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms