Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 AL358876.1-201ENST00000453364 1075 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 RPL37P23-201ENST00000492641 294 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 RNA5SP473-201ENST00000516402 125 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 MINCR-206ENST00000524335 499 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 DCN-210ENST00000547568 823 ntTSL 3 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 AC027216.1-201ENST00000577726 685 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 AP005403.1-201ENST00000579720 229 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 AC108738.1-201ENST00000603703 237 ntBASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
TRAV27A0A087WT01 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AC100757.1-201ENST00000616872 1835 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 RNA5SP394-201ENST00000364216 119 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 RN7SKP69-201ENST00000365390 305 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 RNA5SP131-201ENST00000365452 119 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 OR7E156P-201ENST00000400303 464 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 MRPS21P2-201ENST00000424704 264 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AC021193.1-201ENST00000511607 420 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 RNU6-615P-201ENST00000516065 106 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 MIR7853-201ENST00000584820 132 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AP000769.2-201ENST00000602344 396 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AC067773.1-201ENST00000603284 1094 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AC016590.3-201ENST00000611171 753 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AP005431.1-201ENST00000618479 319 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AL157762.1-201ENST00000619612 415 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 LINC01204-202ENST00000435394 2214 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 AP000432.2-201ENST00000624164 2048 ntBASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
TRAV27A0A087WT01 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
TRAV27A0A087WT01 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TRAV27A0A087WT01 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC4.96□□□□□ -1.61
TRAV27A0A087WT01 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
TRAV27A0A087WT01 AC112198.2-201ENST00000426589 6996 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 OR7E25P-201ENST00000344844 931 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AC115283.1-201ENST00000427353 400 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 CDY8P-201ENST00000428380 1279 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 CDY20P-201ENST00000447528 1279 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 VDAC2P4-201ENST00000452925 711 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 SNRPCP3-201ENST00000474888 476 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 IGBP1P4-201ENST00000503202 879 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 GNG2-208ENST00000554875 430 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 MIR6071-201ENST00000616741 78 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AC129915.3-201ENST00000634128 948 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 AC073869.8-201ENST00000641806 335 ntBASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
TRAV27A0A087WT01 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms