Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 AC079456.1-201ENST00000624010 480 ntBASIC6.86□□□□□ -1.31
SSU72Q9NP77 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC6.86□□□□□ -1.31
SSU72Q9NP77 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SSU72Q9NP77 AC007012.2-201ENST00000623206 1676 ntBASIC6.86□□□□□ -1.31
SSU72Q9NP77 AL139384.2-201ENST00000613809 3590 ntBASIC6.86□□□□□ -1.31
SSU72Q9NP77 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.86□□□□□ -1.31
SSU72Q9NP77 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC6.86□□□□□ -1.31
SSU72Q9NP77 PLRG1-202ENST00000499023 3351 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSU72Q9NP77 TMCC1P1-201ENST00000518897 1980 ntBASIC6.86□□□□□ -1.31
SSU72Q9NP77 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SSU72Q9NP77 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AL157831.2-201ENST00000564681 3095 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 TMEM75-201ENST00000624314 2165 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 COMMD2-203ENST00000473414 3706 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 NIN-204ENST00000382043 4216 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 RNU6-931P-201ENST00000363850 107 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 TP63-205ENST00000392461 1251 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AP003170.5-201ENST00000397185 335 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC010975.2-201ENST00000427781 588 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 MTND1P2-201ENST00000430604 821 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AL590103.1-201ENST00000434488 307 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC245452.2-201ENST00000435222 392 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 RPE-210ENST00000438204 796 ntTSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 FDPSP8-201ENST00000438304 1089 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 USP9YP22-201ENST00000438971 294 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 ELOCP10-201ENST00000440624 327 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 RPE-213ENST00000445268 668 ntTSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 RN7SL382P-201ENST00000482631 282 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 OR11I1P-201ENST00000486033 954 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 NCOR1P1-202ENST00000486162 291 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC147055.4-201ENST00000504399 745 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 LINC01411-204ENST00000510234 938 ntTSL 3 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AP001646.2-201ENST00000528645 1156 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 MIR5708-201ENST00000579723 85 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 MIR4266-201ENST00000583300 55 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC011447.3-202ENST00000593655 555 ntTSL 4 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC083899.3-201ENST00000603413 594 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC007255.2-201ENST00000604053 631 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 ELOCP34-201ENST00000604436 327 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 RN7SL760P-201ENST00000607344 270 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC126175.1-201ENST00000617041 758 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC109454.4-201ENST00000623411 649 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC092447.7-201ENST00000422212 1621 ntBASIC6.85□□□□□ -1.31
SSU72Q9NP77 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 PRRC1-202ENST00000442138 5504 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 DSC1-202ENST00000257198 4225 ntAPPRIS P4 TSL 2 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 ARID5B-201ENST00000279873 7891 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 AC091885.2-201ENST00000510391 1791 ntTSL 3 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
SSU72Q9NP77 PROX1-AS1-202ENST00000433082 5266 ntTSL 5 BASIC6.85□□□□□ -1.31
SSU72Q9NP77 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL355377.1-201ENST00000621125 1653 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.84□□□□□ -1.31
SSU72Q9NP77 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AC119674.1-202ENST00000641333 1860 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 ATXN3-204ENST00000429774 6713 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 AL121657.1-201ENST00000327215 531 ntBASIC6.84□□□□□ -1.31
SSU72Q9NP77 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
SSU72Q9NP77 CTSL3P-201ENST00000354530 657 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms