Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
HDHD3Q9BSH5 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC123912.3-201ENST00000600907 1367 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 RNA5SP477-201ENST00000362639 119 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 SNORD56.6-201ENST00000384569 71 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 PPIAP9-201ENST00000403866 498 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 MIR1275-201ENST00000408770 80 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 RIMKLBP2-201ENST00000424737 654 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AMYP1-201ENST00000440059 1023 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 GAS5-218ENST00000448718 565 ntTSL 2 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC068228.1-201ENST00000461723 211 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 RN7SL188P-201ENST00000469842 285 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC021106.1-201ENST00000509020 1058 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC091912.1-201ENST00000511351 248 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC021193.1-201ENST00000511607 420 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC114781.3-201ENST00000512083 142 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 OR5H7P-201ENST00000514084 930 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 Y_RNA.667-201ENST00000516212 107 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC130364.2-201ENST00000528639 604 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 MIR3154-201ENST00000577829 84 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 ARGFXP2-201ENST00000579304 949 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC138207.8-204ENST00000579588 527 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC063977.5-201ENST00000601044 974 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC125494.2-201ENST00000602431 657 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC108738.1-201ENST00000603703 237 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AL049840.6-201ENST00000604583 345 ntBASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC083798.2-201ENST00000608756 1152 ntTSL 4 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 IPO5-229ENST00000631030 192 ntTSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
HDHD3Q9BSH5 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 MRE11P1-201ENST00000464884 2127 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 SNORA64.1-201ENST00000362600 132 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 RNA5SP187-201ENST00000384400 119 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AL009179.1-201ENST00000406085 265 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AC006335.2-201ENST00000437993 330 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 EEF1B2P3-201ENST00000447718 678 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AC068491.1-201ENST00000449539 1241 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 PSAT1P4-201ENST00000466500 526 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AL357153.4-201ENST00000620487 1016 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 AC090181.3-201ENST00000624777 1514 ntBASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
HDHD3Q9BSH5 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.6 ms