Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 AL356121.1-201ENST00000442911 156 ntBASIC5.5□□□□□ -1.53
CDH12P55289 RPL12P39-201ENST00000455456 496 ntBASIC5.5□□□□□ -1.53
CDH12P55289 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH12P55289 AL603882.1-201ENST00000463059 681 ntBASIC5.5□□□□□ -1.53
CDH12P55289 AC093663.2-201ENST00000484625 313 ntBASIC5.5□□□□□ -1.53
CDH12P55289 MTCO2P9-201ENST00000503214 694 ntBASIC5.5□□□□□ -1.53
CDH12P55289 MEF2C-AS1-211ENST00000514092 501 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH12P55289 SNORA76.2-201ENST00000517095 137 ntBASIC5.5□□□□□ -1.53
CDH12P55289 OR5D2P-201ENST00000524390 911 ntBASIC5.5□□□□□ -1.53
CDH12P55289 NPIPB14P-203ENST00000532298 987 ntBASIC5.5□□□□□ -1.53
CDH12P55289 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC5.5□□□□□ -1.53
CDH12P55289 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH12P55289 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 NPM1P5-201ENST00000557228 838 ntBASIC5.5□□□□□ -1.53
CDH12P55289 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 AC090826.1-203ENST00000569235 490 ntBASIC5.5□□□□□ -1.53
CDH12P55289 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH12P55289 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH12P55289 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.5□□□□□ -1.53
CDH12P55289 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.5□□□□□ -1.53
CDH12P55289 AC006115.2-201ENST00000596823 202 ntBASIC5.5□□□□□ -1.53
CDH12P55289 AL133481.2-203ENST00000607558 139 ntBASIC5.5□□□□□ -1.53
CDH12P55289 AF129408.1-201ENST00000608767 431 ntBASIC5.5□□□□□ -1.53
CDH12P55289 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH12P55289 AC096861.1-201ENST00000616652 240 ntBASIC5.5□□□□□ -1.53
CDH12P55289 RFPL4AP6-201ENST00000616792 846 ntBASIC5.5□□□□□ -1.53
CDH12P55289 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.5□□□□□ -1.53
CDH12P55289 AP000943.4-201ENST00000622912 357 ntBASIC5.5□□□□□ -1.53
CDH12P55289 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH12P55289 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CDH12P55289 AC079776.5-201ENST00000641920 211 ntBASIC5.5□□□□□ -1.53
CDH12P55289 AL355488.2-201ENST00000609909 2850 ntBASIC5.5□□□□□ -1.53
CDH12P55289 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 AC005261.6-201ENST00000623072 1387 ntBASIC5.5□□□□□ -1.53
CDH12P55289 AC026523.2-201ENST00000625039 7739 ntBASIC5.5□□□□□ -1.53
CDH12P55289 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CDH12P55289 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.5□□□□□ -1.53
CDH12P55289 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.5□□□□□ -1.53
CDH12P55289 OR10AB1P-202ENST00000641219 1686 ntBASIC5.5□□□□□ -1.53
CDH12P55289 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.49□□□□□ -1.53
CDH12P55289 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH12P55289 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 RNA5SP110-201ENST00000362638 115 ntBASIC5.49□□□□□ -1.53
CDH12P55289 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH12P55289 MIR188-201ENST00000385034 86 ntBASIC5.49□□□□□ -1.53
CDH12P55289 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CDH12P55289 RN7SKP108-201ENST00000411367 328 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 RPL7AP14-201ENST00000424041 802 ntBASIC5.49□□□□□ -1.53
CDH12P55289 RPL12P12-201ENST00000424633 501 ntBASIC5.49□□□□□ -1.53
CDH12P55289 MTCO2P1-201ENST00000424648 477 ntBASIC5.49□□□□□ -1.53
CDH12P55289 MRPL50P1-201ENST00000431951 384 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 MTND2P21-201ENST00000436242 1042 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 AC097359.1-201ENST00000447946 463 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC016027.4-201ENST00000450866 277 ntBASIC5.49□□□□□ -1.53
CDH12P55289 FRG2FP-204ENST00000453982 852 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH12P55289 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC104849.1-201ENST00000462623 405 ntBASIC5.49□□□□□ -1.53
CDH12P55289 PFN1P6-201ENST00000476786 399 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 AK4P6-201ENST00000505168 528 ntBASIC5.49□□□□□ -1.53
CDH12P55289 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CDH12P55289 GUSBP9-201ENST00000510138 584 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC103833.1-201ENST00000517442 172 ntBASIC5.49□□□□□ -1.53
CDH12P55289 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH12P55289 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH12P55289 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH12P55289 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC008147.3-201ENST00000548666 354 ntBASIC5.49□□□□□ -1.53
CDH12P55289 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.49□□□□□ -1.53
CDH12P55289 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.49□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 100.4 ms