Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC7.79□□□□□ -1.16
CLTCL1P53675 CDH12P4-201ENST00000517835 295 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 CDH12P3-201ENST00000517935 295 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC7.79□□□□□ -1.16
CLTCL1P53675 CDH12P1-201ENST00000518435 295 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC7.79□□□□□ -1.16
CLTCL1P53675 AC122688.1-201ENST00000541494 223 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC7.79□□□□□ -1.16
CLTCL1P53675 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC7.79□□□□□ -1.16
CLTCL1P53675 AC091953.3-201ENST00000623220 236 ntBASIC7.79□□□□□ -1.16
CLTCL1P53675 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC7.79□□□□□ -1.16
CLTCL1P53675 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLTCL1P53675 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLTCL1P53675 ALB-220ENST00000621628 1606 ntTSL 5 BASIC7.79□□□□□ -1.16
CLTCL1P53675 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC7.79□□□□□ -1.16
CLTCL1P53675 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC7.79□□□□□ -1.16
CLTCL1P53675 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC7.79□□□□□ -1.16
CLTCL1P53675 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLTCL1P53675 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC7.79□□□□□ -1.16
CLTCL1P53675 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 RNA5SP87-201ENST00000384155 118 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 SNORA70.9-201ENST00000384370 135 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 ATP6V1G1P7-201ENST00000415853 349 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.78□□□□□ -1.16
CLTCL1P53675 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 DNAJB5P1-201ENST00000454004 806 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 AP001922.4-201ENST00000526967 290 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 AC002090.1-201ENST00000625000 2138 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC7.78□□□□□ -1.16
CLTCL1P53675 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC7.78□□□□□ -1.16
CLTCL1P53675 CDYL2-207ENST00000570137 8159 ntAPPRIS P2 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CLTCL1P53675 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 RNA5SP305-201ENST00000362665 119 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC7.78□□□□□ -1.16
CLTCL1P53675 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC7.78□□□□□ -1.16
CLTCL1P53675 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC7.78□□□□□ -1.16
CLTCL1P53675 Z80107.2-201ENST00000445127 392 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 AC109464.1-201ENST00000511091 819 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC7.78□□□□□ -1.16
CLTCL1P53675 AC092593.2-201ENST00000513866 913 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC7.78□□□□□ -1.16
CLTCL1P53675 AL627230.1-201ENST00000613077 211 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 AL591926.8-201ENST00000616876 211 ntBASIC7.78□□□□□ -1.16
CLTCL1P53675 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.78□□□□□ -1.16
CLTCL1P53675 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.16
CLTCL1P53675 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CLTCL1P53675 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CLTCL1P53675 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC7.77□□□□□ -1.17
CLTCL1P53675 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.77□□□□□ -1.17
CLTCL1P53675 RNF10P1-201ENST00000418589 369 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 RIMKLBP2-201ENST00000424737 654 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 AC092647.2-201ENST00000452998 253 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 RN7SL97P-201ENST00000486780 299 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 AC109462.1-201ENST00000491087 368 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 AC108043.1-201ENST00000512696 574 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.77□□□□□ -1.17
CLTCL1P53675 AP002373.2-201ENST00000541631 1060 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC7.77□□□□□ -1.17
CLTCL1P53675 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC7.77□□□□□ -1.17
CLTCL1P53675 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.77□□□□□ -1.17
CLTCL1P53675 AC011840.5-201ENST00000582125 771 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 AC060780.2-201ENST00000589047 198 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 AP005432.2-201ENST00000608162 586 ntBASIC7.77□□□□□ -1.17
CLTCL1P53675 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.17
CLTCL1P53675 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 OCLN-205ENST00000538151 5391 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.77□□□□□ -1.17
CLTCL1P53675 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 AC006600.2-201ENST00000624834 2506 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC7.76□□□□□ -1.17
CLTCL1P53675 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC7.76□□□□□ -1.17
CLTCL1P53675 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC7.76□□□□□ -1.17
CLTCL1P53675 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 AC079753.1-201ENST00000623243 3868 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC7.76□□□□□ -1.17
CLTCL1P53675 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.76□□□□□ -1.17
CLTCL1P53675 EIF3KP3-201ENST00000514461 639 ntBASIC7.76□□□□□ -1.17
CLTCL1P53675 AC005341.1-201ENST00000571086 708 ntBASIC7.76□□□□□ -1.17
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms