Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 NOX1-203ENST00000372964 661 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 AL137058.2-203ENST00000398039 825 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 AL079342.2-201ENST00000403367 482 ntBASIC7.17□□□□□ -1.26
LIG3P49916 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 AC004022.2-201ENST00000413824 193 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 DUTP4-201ENST00000424782 475 ntBASIC7.17□□□□□ -1.26
LIG3P49916 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 PSPC1P2-201ENST00000455130 225 ntBASIC7.17□□□□□ -1.26
LIG3P49916 CDC42P1-201ENST00000456658 548 ntBASIC7.17□□□□□ -1.26
LIG3P49916 WBP1LP1-201ENST00000460451 896 ntBASIC7.17□□□□□ -1.26
LIG3P49916 RN7SL149P-201ENST00000465197 281 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 RPL35AP19-201ENST00000469425 329 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC091982.1-202ENST00000473923 343 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC018639.1-201ENST00000492994 442 ntBASIC7.17□□□□□ -1.26
LIG3P49916 RPL7L1P7-201ENST00000509986 724 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AK6-204ENST00000512561 587 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG3P49916 SCARNA18.2-201ENST00000516882 84 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC120036.3-201ENST00000517826 292 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC020937.1-201ENST00000519677 1013 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AP001803.1-201ENST00000525668 147 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.17□□□□□ -1.26
LIG3P49916 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG3P49916 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 AC015914.1-201ENST00000558050 1072 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG3P49916 ATP5F1P7-201ENST00000567330 760 ntBASIC7.17□□□□□ -1.26
LIG3P49916 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 EIF4A2P1-201ENST00000587313 1063 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 AP001542.2-201ENST00000593141 364 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC092032.1-201ENST00000603090 165 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AL583832.1-201ENST00000603227 784 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG3P49916 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 AL139286.2-201ENST00000606838 396 ntBASIC7.17□□□□□ -1.26
LIG3P49916 MIR8082-201ENST00000612488 81 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG3P49916 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 AP003072.4-201ENST00000624580 310 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC007494.3-201ENST00000624660 743 ntBASIC7.17□□□□□ -1.26
LIG3P49916 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG3P49916 RMDN2-AS1-210ENST00000630021 1053 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG3P49916 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LIG3P49916 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG3P49916 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG3P49916 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG3P49916 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG3P49916 AC000367.1-201ENST00000452711 1766 ntBASIC7.17□□□□□ -1.26
LIG3P49916 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 MTND5P29-201ENST00000458676 1807 ntBASIC7.17□□□□□ -1.26
LIG3P49916 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 EEF1A1P20-201ENST00000514852 1386 ntBASIC7.17□□□□□ -1.26
LIG3P49916 AC093844.1-201ENST00000514910 1361 ntBASIC7.17□□□□□ -1.26
LIG3P49916 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG3P49916 NCALD-201ENST00000220931 3283 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG3P49916 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG3P49916 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.17□□□□□ -1.26
LIG3P49916 PSG10P-201ENST00000501199 1500 ntBASIC7.17□□□□□ -1.26
LIG3P49916 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 SGO1-AS1-205ENST00000634837 1677 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 OR7G2-202ENST00000641081 3015 ntAPPRIS ALT2 BASIC7.16□□□□□ -1.26
LIG3P49916 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 LINC01537-201ENST00000450804 2450 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 RAB9B-201ENST00000243298 3748 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 MIR152-201ENST00000385212 87 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AL034403.1-201ENST00000399414 885 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC022028.1-201ENST00000412054 408 ntBASIC7.16□□□□□ -1.26
LIG3P49916 ALDH7A1P4-201ENST00000412255 178 ntBASIC7.16□□□□□ -1.26
LIG3P49916 GS1-594A7.3-201ENST00000421585 574 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 FTLP17-201ENST00000432567 525 ntBASIC7.16□□□□□ -1.26
LIG3P49916 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC7.16□□□□□ -1.26
LIG3P49916 AC002542.1-201ENST00000440683 193 ntBASIC7.16□□□□□ -1.26
LIG3P49916 VN1R32P-201ENST00000452234 905 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC7.16□□□□□ -1.26
LIG3P49916 CCNJP2-201ENST00000457810 1163 ntBASIC7.16□□□□□ -1.26
LIG3P49916 CXCR6-203ENST00000457814 1184 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
LIG3P49916 AC115223.1-201ENST00000466377 870 ntBASIC7.16□□□□□ -1.26
LIG3P49916 RPSAP48-201ENST00000466509 889 ntBASIC7.16□□□□□ -1.26
LIG3P49916 AC011979.1-201ENST00000472300 483 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms