Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 HMGN1P36-201ENST00000446623 298 ntBASIC6.08□□□□□ -1.44
CASP4P49662 VDAC2P4-201ENST00000452925 711 ntBASIC6.08□□□□□ -1.44
CASP4P49662 NXT1P1-201ENST00000458481 316 ntBASIC6.08□□□□□ -1.44
CASP4P49662 ATP5LP5-201ENST00000483050 299 ntBASIC6.08□□□□□ -1.44
CASP4P49662 PPP1R11P1-201ENST00000486095 376 ntBASIC6.08□□□□□ -1.44
CASP4P49662 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASP4P49662 AC138866.2-201ENST00000508650 584 ntBASIC6.08□□□□□ -1.44
CASP4P49662 AC109481.1-201ENST00000509173 282 ntBASIC6.08□□□□□ -1.44
CASP4P49662 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.08□□□□□ -1.44
CASP4P49662 AC111000.6-201ENST00000514471 709 ntBASIC6.08□□□□□ -1.44
CASP4P49662 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.08□□□□□ -1.44
CASP4P49662 AC112191.2-201ENST00000522428 333 ntBASIC6.08□□□□□ -1.44
CASP4P49662 OR5AM1P-201ENST00000532136 1032 ntBASIC6.08□□□□□ -1.44
CASP4P49662 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.08□□□□□ -1.44
CASP4P49662 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.08□□□□□ -1.44
CASP4P49662 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.08□□□□□ -1.44
CASP4P49662 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CASP4P49662 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.08□□□□□ -1.44
CASP4P49662 RN7SL787P-201ENST00000613000 284 ntBASIC6.08□□□□□ -1.44
CASP4P49662 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.08□□□□□ -1.44
CASP4P49662 AC005618.4-201ENST00000625053 554 ntBASIC6.08□□□□□ -1.44
CASP4P49662 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
CASP4P49662 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
CASP4P49662 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CASP4P49662 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.08□□□□□ -1.44
CASP4P49662 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.08□□□□□ -1.44
CASP4P49662 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
CASP4P49662 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
CASP4P49662 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CASP4P49662 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 OR2AT4-202ENST00000641504 8661 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CASP4P49662 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.07□□□□□ -1.44
CASP4P49662 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 AL034546.1-201ENST00000623740 3693 ntBASIC6.07□□□□□ -1.44
CASP4P49662 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 AL596448.1-201ENST00000415024 392 ntBASIC6.07□□□□□ -1.44
CASP4P49662 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.07□□□□□ -1.44
CASP4P49662 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.07□□□□□ -1.44
CASP4P49662 AC138761.5-201ENST00000433967 325 ntBASIC6.07□□□□□ -1.44
CASP4P49662 Z84478.1-201ENST00000438230 1219 ntBASIC6.07□□□□□ -1.44
CASP4P49662 LINC02210-201ENST00000444561 288 ntBASIC6.07□□□□□ -1.44
CASP4P49662 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 AL450023.1-201ENST00000450868 751 ntBASIC6.07□□□□□ -1.44
CASP4P49662 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.07□□□□□ -1.44
CASP4P49662 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 MRPS21P7-201ENST00000566937 238 ntBASIC6.07□□□□□ -1.44
CASP4P49662 AC010547.6-201ENST00000571789 193 ntBASIC6.07□□□□□ -1.44
CASP4P49662 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.07□□□□□ -1.44
CASP4P49662 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 AC008691.1-209ENST00000642094 814 ntBASIC6.07□□□□□ -1.44
CASP4P49662 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.07□□□□□ -1.44
CASP4P49662 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CASP4P49662 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.07□□□□□ -1.44
CASP4P49662 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.07□□□□□ -1.44
CASP4P49662 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC6.06□□□□□ -1.44
CASP4P49662 MT-RNR2-201ENST00000387347 1559 ntBASIC6.06□□□□□ -1.44
CASP4P49662 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 AL078595.2-201ENST00000605309 1780 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 AC007938.2-201ENST00000604666 2634 ntBASIC6.06□□□□□ -1.44
CASP4P49662 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.06□□□□□ -1.44
CASP4P49662 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 RNA5SP46-201ENST00000362370 120 ntBASIC6.06□□□□□ -1.44
CASP4P49662 RNA5SP453-201ENST00000362503 119 ntBASIC6.06□□□□□ -1.44
CASP4P49662 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 SNORA11.3-201ENST00000408471 128 ntBASIC6.06□□□□□ -1.44
CASP4P49662 OR6E1P-201ENST00000414424 923 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.06□□□□□ -1.44
CASP4P49662 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.06□□□□□ -1.44
CASP4P49662 RPL34P3-201ENST00000421454 338 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AL133173.1-201ENST00000423458 397 ntBASIC6.06□□□□□ -1.44
CASP4P49662 BX276092.6-201ENST00000430476 250 ntBASIC6.06□□□□□ -1.44
CASP4P49662 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.06□□□□□ -1.44
CASP4P49662 AL161636.2-201ENST00000445179 927 ntBASIC6.06□□□□□ -1.44
CASP4P49662 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CASP4P49662 RPL31P15-201ENST00000449770 338 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 119.2 ms