Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.73□□□□□ -1.49
HNF4AP41235 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.73□□□□□ -1.49
HNF4AP41235 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.73□□□□□ -1.49
HNF4AP41235 AL359955.1-201ENST00000455242 3275 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HNF4AP41235 OR7E156P-201ENST00000400303 464 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC5.73□□□□□ -1.49
HNF4AP41235 AC069154.1-201ENST00000432914 542 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AL445928.1-201ENST00000435545 222 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 KRT8P51-201ENST00000438938 274 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AL663074.2-201ENST00000440621 479 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 RPS7P3-201ENST00000443360 580 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AC068228.1-201ENST00000461723 211 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AC023194.2-201ENST00000465398 406 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AP002884.1-201ENST00000479691 655 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.73□□□□□ -1.49
HNF4AP41235 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HNF4AP41235 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC5.73□□□□□ -1.49
HNF4AP41235 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.73□□□□□ -1.49
HNF4AP41235 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HNF4AP41235 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.73□□□□□ -1.49
HNF4AP41235 NPM1P45-201ENST00000583151 559 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AC010320.2-201ENST00000593857 551 ntTSL 4 BASIC5.73□□□□□ -1.49
HNF4AP41235 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
HNF4AP41235 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.73□□□□□ -1.49
HNF4AP41235 AC012213.4-201ENST00000606457 354 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 AP001437.1-201ENST00000608783 456 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 MIR6071-201ENST00000616741 78 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.73□□□□□ -1.49
HNF4AP41235 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.73□□□□□ -1.49
HNF4AP41235 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
HNF4AP41235 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
HNF4AP41235 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.73□□□□□ -1.49
HNF4AP41235 AC092451.3-201ENST00000625067 1343 ntBASIC5.73□□□□□ -1.49
HNF4AP41235 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC5.72□□□□□ -1.49
HNF4AP41235 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
HNF4AP41235 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 AC027228.2-201ENST00000567141 2154 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.72□□□□□ -1.49
HNF4AP41235 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 AC010132.2-201ENST00000295493 1043 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HNF4AP41235 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HNF4AP41235 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HNF4AP41235 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
HNF4AP41235 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 RPL5P19-201ENST00000404228 893 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.72□□□□□ -1.49
HNF4AP41235 RPS20P25-201ENST00000412447 352 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 AC009506.2-201ENST00000420635 840 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC5.72□□□□□ -1.49
HNF4AP41235 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC5.72□□□□□ -1.49
HNF4AP41235 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 Z83838.1-202ENST00000456225 839 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 AC093719.1-201ENST00000480427 441 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 AC008629.2-201ENST00000503783 483 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC5.72□□□□□ -1.49
HNF4AP41235 RNA5SP340-201ENST00000517132 107 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.72□□□□□ -1.49
HNF4AP41235 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.72□□□□□ -1.49
HNF4AP41235 AL121594.2-201ENST00000541658 472 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 CYCSP38-201ENST00000559840 322 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.72□□□□□ -1.49
HNF4AP41235 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 AC027281.1-201ENST00000574178 758 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 AP005119.1-201ENST00000580956 292 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 AC008507.3-201ENST00000585753 472 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 AC009303.3-201ENST00000591103 736 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.72□□□□□ -1.49
HNF4AP41235 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.72□□□□□ -1.49
HNF4AP41235 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HNF4AP41235 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
HNF4AP41235 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 VPS35P1-201ENST00000563400 1518 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.72□□□□□ -1.49
HNF4AP41235 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
HNF4AP41235 AL355488.2-201ENST00000609909 2850 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 KYNUP3-201ENST00000574386 1341 ntBASIC5.72□□□□□ -1.49
HNF4AP41235 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
HNF4AP41235 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.71□□□□□ -1.5
HNF4AP41235 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
HNF4AP41235 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HNF4AP41235 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
HNF4AP41235 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.71□□□□□ -1.5
HNF4AP41235 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
HNF4AP41235 RNU6-386P-201ENST00000362650 107 ntBASIC5.71□□□□□ -1.5
HNF4AP41235 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms