Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 OR2AT2P-201ENST00000413438 905 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 RPS4XP5-201ENST00000419038 768 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 NME1P1-201ENST00000420914 382 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC016027.5-201ENST00000427227 210 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 TRIM60P13-201ENST00000432350 1283 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 SUMO2P3-201ENST00000438311 288 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC114878.1-201ENST00000441166 358 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AP000281.1-201ENST00000444036 316 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 LRRC37A14P-201ENST00000452297 462 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 RPS17P15-201ENST00000475609 349 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 SPINK13-203ENST00000512953 1022 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC125612.1-201ENST00000547580 377 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC007225.2-201ENST00000562529 256 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 SNORD95-201ENST00000579879 68 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AL360012.1-201ENST00000602813 131 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC093388.1-201ENST00000609166 430 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 BX323046.1-201ENST00000610145 535 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC004477.3-201ENST00000614061 590 ntBASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAB40ALP0C0E4 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC004656.1-201ENST00000568479 4951 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC140479.2-201ENST00000421567 3130 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 THAP12P9-201ENST00000503971 2360 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RNA5SP211-201ENST00000365516 117 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 U3.25-201ENST00000391209 220 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RN7SKP151-201ENST00000410230 316 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AL513325.1-201ENST00000417716 1034 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RSL24D1P8-201ENST00000434442 492 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC002504.1-201ENST00000438281 691 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AL451063.1-201ENST00000450164 1133 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC090022.1-201ENST00000546569 311 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 IGBP1P1-201ENST00000554337 1009 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 MIR3176-201ENST00000582210 90 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 MIR4260-201ENST00000583107 67 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC022467.1-201ENST00000614738 749 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AL031658.2-201ENST00000616850 651 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RN7SL544P-201ENST00000617232 284 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RN7SL763P-201ENST00000620922 284 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AL691477.1-201ENST00000624398 162 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 AC114876.1-201ENST00000490962 1366 ntBASIC5.55□□□□□ -1.52
RAB40ALP0C0E4 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
RAB40ALP0C0E4 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
RAB40ALP0C0E4 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
RAB40ALP0C0E4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms