Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 MIR6721-201ENST00000617181 87 ntBASIC4.67□□□□□ -1.66
CTSDP07339 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 IFI16-205ENST00000368132 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 AC027088.4-201ENST00000611559 1947 ntBASIC4.67□□□□□ -1.66
CTSDP07339 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.67□□□□□ -1.66
CTSDP07339 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CTSDP07339 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 AC068870.1-201ENST00000563737 2455 ntBASIC4.67□□□□□ -1.66
CTSDP07339 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CTSDP07339 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC4.66□□□□□ -1.66
CTSDP07339 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
CTSDP07339 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 OR9K1P-201ENST00000326513 941 ntBASIC4.66□□□□□ -1.66
CTSDP07339 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 SNORA48.4-201ENST00000391089 134 ntBASIC4.66□□□□□ -1.66
CTSDP07339 RBBP4P5-201ENST00000398583 1266 ntBASIC4.66□□□□□ -1.66
CTSDP07339 YWHAZP6-201ENST00000399764 738 ntBASIC4.66□□□□□ -1.66
CTSDP07339 RNA5SP198-201ENST00000410376 127 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AL357752.1-201ENST00000412817 349 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 RPL7P56-201ENST00000429441 717 ntBASIC4.66□□□□□ -1.66
CTSDP07339 RPL7AP49-201ENST00000429522 581 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC4.66□□□□□ -1.66
CTSDP07339 AL591438.1-201ENST00000433508 581 ntBASIC4.66□□□□□ -1.66
CTSDP07339 GAPDHP59-201ENST00000435908 267 ntBASIC4.66□□□□□ -1.66
CTSDP07339 TUBB4BP6-201ENST00000437576 479 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC4.66□□□□□ -1.66
CTSDP07339 AC010240.2-201ENST00000445363 1205 ntBASIC4.66□□□□□ -1.66
CTSDP07339 EEF1B2P3-201ENST00000447718 678 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 RN7SL254P-201ENST00000460609 284 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AP000797.2-201ENST00000475768 606 ntBASIC4.66□□□□□ -1.66
CTSDP07339 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 RN7SL570P-201ENST00000484405 292 ntBASIC4.66□□□□□ -1.66
CTSDP07339 CSNK1A1P3-201ENST00000504105 330 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 AC021106.1-201ENST00000509020 1058 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC139365.2-201ENST00000517972 253 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC4.66□□□□□ -1.66
CTSDP07339 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC4.66□□□□□ -1.66
CTSDP07339 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC4.66□□□□□ -1.66
CTSDP07339 AC007346.1-201ENST00000569208 867 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 OR7A8P-201ENST00000595427 913 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC4.66□□□□□ -1.66
CTSDP07339 uc_338.31-201ENST00000615595 186 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC090607.5-201ENST00000615692 224 ntBASIC4.66□□□□□ -1.66
CTSDP07339 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.66□□□□□ -1.66
CTSDP07339 FAM27E2-201ENST00000619668 403 ntBASIC4.66□□□□□ -1.66
CTSDP07339 AC091932.2-201ENST00000623014 291 ntBASIC4.66□□□□□ -1.66
CTSDP07339 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
CTSDP07339 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC4.66□□□□□ -1.66
CTSDP07339 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 AC104623.2-202ENST00000623477 4002 ntBASIC4.66□□□□□ -1.66
CTSDP07339 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC4.66□□□□□ -1.66
CTSDP07339 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
CTSDP07339 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC4.65□□□□□ -1.66
CTSDP07339 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC4.65□□□□□ -1.66
CTSDP07339 AC019072.1-201ENST00000604535 1551 ntBASIC4.65□□□□□ -1.66
CTSDP07339 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTSDP07339 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
CTSDP07339 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.65□□□□□ -1.66
CTSDP07339 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTSDP07339 AL078621.3-201ENST00000623707 2042 ntBASIC4.65□□□□□ -1.66
CTSDP07339 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CTSDP07339 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.66
CTSDP07339 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
CTSDP07339 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTSDP07339 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
CTSDP07339 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CTSDP07339 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
CTSDP07339 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CTSDP07339 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CTSDP07339 RN7SKP171-201ENST00000364417 303 ntBASIC4.65□□□□□ -1.67
CTSDP07339 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CTSDP07339 SNORD56.6-201ENST00000384569 71 ntBASIC4.65□□□□□ -1.67
CTSDP07339 PPIAP9-201ENST00000403866 498 ntBASIC4.65□□□□□ -1.67
CTSDP07339 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CTSDP07339 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC4.65□□□□□ -1.67
CTSDP07339 AC016772.1-201ENST00000444170 1261 ntBASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 310.7 ms