Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 MIR122-201ENST00000385044 85 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 RNA5SP251-201ENST00000410614 137 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AL121882.1-201ENST00000422893 417 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 PRUNEP1-201ENST00000425846 705 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC114973.1-201ENST00000429057 632 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC092473.1-201ENST00000441098 221 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 PPIAP7-201ENST00000454070 489 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 Z83838.1-202ENST00000456225 839 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 Y_RNA.710-201ENST00000516975 110 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 IGLVIV-64-201ENST00000518581 301 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AP005639.1-201ENST00000526939 192 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AP000620.1-201ENST00000527147 504 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AP004609.2-201ENST00000532177 190 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC024589.2-201ENST00000605642 1294 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 MIR6798-201ENST00000612887 67 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 U1.34-201ENST00000618578 162 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 AC011503.2-201ENST00000594230 1500 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 IFIT1P1-201ENST00000400497 1449 ntBASIC6.25□□□□□ -1.41
DKK3Q9UBP4 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.25□□□□□ -1.41
DKK3Q9UBP4 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC011369.2-201ENST00000624423 1567 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 CA1-225ENST00000626824 2405 ntTSL 5 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC119674.1-213ENST00000641177 1386 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 SNORA21-201ENST00000362423 132 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 RNA5SP110-201ENST00000362638 115 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 RNA5SP433-201ENST00000364491 114 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 SNORD51.1-201ENST00000365405 77 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 CAV1-204ENST00000393470 598 ntTSL 4 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AMZ2P2-201ENST00000406819 1057 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC013268.2-201ENST00000420753 337 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC092447.3-201ENST00000426027 686 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC069154.1-201ENST00000432914 542 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 LYPLA1P1-201ENST00000434514 622 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC009237.1-201ENST00000442127 744 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 RPL6P30-201ENST00000443382 862 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 HMGN1P2-201ENST00000445197 310 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC094085.1-201ENST00000468914 584 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AP002884.1-201ENST00000479691 655 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 OR9N1P-201ENST00000491296 333 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 MTCO2P9-201ENST00000503214 694 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC108157.1-201ENST00000510511 539 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 PRMT5P1-201ENST00000514351 598 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 RNA5SP400-201ENST00000517155 111 ntBASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.24□□□□□ -1.41
DKK3Q9UBP4 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms