Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AL390879.1-201ENST00000439143 386 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 ATP5LP3-201ENST00000514223 304 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 SCARNA21.2-201ENST00000516600 166 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AL163952.1-202ENST00000569625 600 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AC090607.5-201ENST00000615692 224 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AL157762.1-201ENST00000619612 415 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 MFSD8-239ENST00000641590 2479 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.09□□□□□ -1.59
CLCF1Q9UBD9 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.09□□□□□ -1.6
CLCF1Q9UBD9 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLCF1Q9UBD9 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.09□□□□□ -1.6
CLCF1Q9UBD9 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
CLCF1Q9UBD9 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.6
CLCF1Q9UBD9 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC114786.1-201ENST00000512892 1415 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 RN7SKP124-201ENST00000364730 341 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 CYP2AC1P-201ENST00000407830 1173 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 RPS3AP38-201ENST00000435889 763 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AL450996.1-201ENST00000445574 1202 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 RPS23P2-201ENST00000463671 415 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 RN7SL284P-201ENST00000498823 275 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC078899.1-201ENST00000521432 1185 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 HSPE1P2-201ENST00000554777 306 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC007225.2-201ENST00000562529 256 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC093524.1-201ENST00000564266 1094 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 MAPK10-350ENST00000641777 965 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC022164.1-201ENST00000568767 2673 ntBASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.08□□□□□ -1.6
CLCF1Q9UBD9 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 RN7SKP160-201ENST00000363804 340 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC005522.1-201ENST00000395416 346 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 GAPDHP42-201ENST00000406848 981 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC073410.1-201ENST00000435125 589 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 REG1CP-206ENST00000447469 496 ntBASIC5.07□□□□□ -1.6
CLCF1Q9UBD9 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms