Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 OR6E1P-201ENST00000414424 923 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 SUMO2P1-206ENST00000445436 284 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 RN7SL727P-201ENST00000482164 296 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC009120.1-201ENST00000493458 473 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 BX510359.5-201ENST00000515651 304 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC139365.2-201ENST00000517972 253 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC007204.2-201ENST00000615022 616 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 ITGA1-201ENST00000282588 10757 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC6.92□□□□□ -1.3
RPAP1Q9BWH6 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 RNU6-171P-201ENST00000384354 107 ntBASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 VN1R21P-201ENST00000426703 765 ntBASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 AC005297.1-201ENST00000444765 862 ntBASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 RN7SL184P-201ENST00000488308 297 ntBASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 IGLV2-28-201ENST00000520681 304 ntBASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 CCT5-215ENST00000625723 135 ntTSL 5 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.91□□□□□ -1.3
RPAP1Q9BWH6 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 AL158152.1-201ENST00000602652 1435 ntBASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.9□□□□□ -1.3
RPAP1Q9BWH6 U3.7-201ENST00000363668 216 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 DPPA2P3-201ENST00000411853 655 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 CRIP1P1-201ENST00000427567 185 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AC099670.2-201ENST00000435130 321 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AC012075.1-201ENST00000436549 580 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 CYCSP51-201ENST00000443545 318 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 OR7E116P-201ENST00000448529 957 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 RN7SL583P-201ENST00000475692 287 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 UBA52P7-201ENST00000486088 380 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AC096996.1-201ENST00000563813 325 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AL133481.2-203ENST00000607558 139 ntBASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
RPAP1Q9BWH6 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AL159987.1-201ENST00000347911 293 ntBASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 CFL1P1-202ENST00000432948 411 ntBASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AC073610.1-201ENST00000489971 396 ntBASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC6.89□□□□□ -1.31
RPAP1Q9BWH6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC6.89□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 72.1 ms