Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 SNORA11.3-201ENST00000408471 128 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 RNA5SP178-201ENST00000410380 128 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 RIMKLBP2-201ENST00000424737 654 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 RPL7P56-201ENST00000429441 717 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC092106.1-201ENST00000444291 373 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 IGBP1P3-201ENST00000447449 1000 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AZGP1P2-201ENST00000454506 345 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 RPS27AP2-201ENST00000457576 465 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 ASB8-202ENST00000535055 657 ntTSL 2 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC027544.3-201ENST00000535082 757 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC020978.7-201ENST00000575953 1187 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 OR7A1P-201ENST00000601206 970 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 FO393422.1-201ENST00000603908 708 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AL118522.2-201ENST00000616045 615 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 SNORA11.6-201ENST00000619030 128 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC005618.4-201ENST00000625053 554 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 NEK3-211ENST00000629912 141 ntTSL 5 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 KARSP1-201ENST00000451871 1752 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC013268.3-201ENST00000262716 2324 ntBASIC4.62□□□□□ -1.67
GAFA1Q96PS6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC4.62□□□□□ -1.67
GAFA1Q96PS6 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RN7SKP6-201ENST00000364795 319 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC099670.2-201ENST00000435130 321 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC019185.1-201ENST00000442718 389 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AL358876.1-201ENST00000453364 1075 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC083899.1-201ENST00000454465 3819 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RN7SL188P-201ENST00000469842 285 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RPL7P51-201ENST00000490532 749 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC104109.1-201ENST00000498563 436 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RN7SL284P-201ENST00000498823 275 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC022404.1-201ENST00000555320 273 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 MIR1273E-201ENST00000581165 102 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC104695.2-201ENST00000605056 775 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AL691477.1-201ENST00000624398 162 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 AC006206.1-201ENST00000544842 3387 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 MARK2P4-201ENST00000503381 2380 ntBASIC4.61□□□□□ -1.67
GAFA1Q96PS6 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
GAFA1Q96PS6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.6□□□□□ -1.67
GAFA1Q96PS6 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
GAFA1Q96PS6 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
GAFA1Q96PS6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
GAFA1Q96PS6 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms