Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 MYL6P5-201ENST00000412707 459 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC245096.1-201ENST00000413104 546 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 SEPT7P8-201ENST00000413308 775 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 PRUNEP1-201ENST00000425846 705 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AL365220.1-201ENST00000432923 399 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 SNRPFP2-201ENST00000440710 251 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC104339.1-201ENST00000465478 348 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC108729.2-201ENST00000476543 840 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 FABP5P6-201ENST00000510588 409 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC026782.2-201ENST00000510845 636 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 RNU6-319P-201ENST00000516025 108 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 VTA1P2-201ENST00000520205 911 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 MYRFL-202ENST00000535034 881 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC124916.2-201ENST00000604416 224 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AL359091.2-201ENST00000609303 556 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC004801.6-201ENST00000616571 978 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AL683826.1-201ENST00000624104 627 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC005225.5-201ENST00000623547 2225 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 TTC41P-205ENST00000551270 3963 ntBASIC6.76□□□□□ -1.33
CDK5RAP3Q96JB5 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 OR10AB1P-202ENST00000641219 1686 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 SNORD1C-201ENST00000363315 78 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 ST13P16-201ENST00000401760 781 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 MTND2P21-201ENST00000436242 1042 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL390879.1-201ENST00000439143 386 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC007000.2-201ENST00000442564 487 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL161722.1-201ENST00000446972 1032 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 EIF2S2P5-201ENST00000457635 968 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC104164.1-201ENST00000460282 590 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AK4P6-201ENST00000505168 528 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 HSD3BP3-201ENST00000514706 994 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 RN7SKP288-201ENST00000516227 268 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 FAU-203ENST00000525297 355 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC084121.1-201ENST00000533882 835 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL845552.1-201ENST00000556820 323 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC104072.1-201ENST00000568817 668 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC002310.3-201ENST00000569728 723 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC027216.1-201ENST00000577726 685 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 BNIP3P40-201ENST00000596017 556 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC135178.6-201ENST00000605314 398 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AC017076.1-201ENST00000607613 578 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 MIR6780B-201ENST00000610307 79 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 AL163051.2-201ENST00000618976 735 ntBASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
CDK5RAP3Q96JB5 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms