Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 RNU6-618P-201ENST00000363518 112 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 MIR7-1-201ENST00000384871 110 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 RPS7P8-201ENST00000418311 581 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC013470.3-201ENST00000420252 1194 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AL136231.1-201ENST00000429407 730 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AL022324.2-201ENST00000434827 780 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC242426.1-201ENST00000435270 960 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 RPS4XP17-201ENST00000479057 754 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC098583.1-201ENST00000480875 255 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC104997.1-201ENST00000519761 717 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC138832.1-201ENST00000522871 556 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 CASP1P2-201ENST00000526830 1258 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AP001804.2-201ENST00000533932 910 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC005632.2-201ENST00000564271 828 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 RFPL4AP6-201ENST00000616792 846 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 SOCS5P3-201ENST00000425115 1576 ntBASIC5.19□□□□□ -1.58
RFT1Q96AA3 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RFT1Q96AA3 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
RFT1Q96AA3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFT1Q96AA3 LYARP1-201ENST00000436977 1501 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFT1Q96AA3 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFT1Q96AA3 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFT1Q96AA3 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFT1Q96AA3 OR13C3-201ENST00000374781 1108 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AL672167.2-201ENST00000377164 879 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 SNORA70.6-201ENST00000383934 134 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 RNA5SP156-201ENST00000410250 110 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 MYL6P5-201ENST00000412707 459 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 NMD3P2-201ENST00000421815 761 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 ARMC4P1-201ENST00000438905 707 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 ZNF619P1-201ENST00000446539 752 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AL445991.1-201ENST00000450381 475 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC114324.2-202ENST00000503812 134 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 RNU6-319P-201ENST00000516025 108 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 SEC11B-201ENST00000518383 499 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 DPRXP4-201ENST00000578053 568 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AL513327.3-201ENST00000602618 469 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 AL353729.2-201ENST00000605859 1249 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC015922.4-201ENST00000612568 690 ntBASIC5.18□□□□□ -1.58
RFT1Q96AA3 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.18□□□□□ -1.58
RFT1Q96AA3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms