Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 RNA5SP178-201ENST00000410380 128 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AL596448.1-201ENST00000415024 392 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 NAP1L4P2-201ENST00000425958 899 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AC242426.1-201ENST00000435270 960 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 YWHAEP1-201ENST00000453697 763 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 RN7SL72P-201ENST00000460697 269 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 PDCL3P4-201ENST00000489621 720 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 DUTP7-201ENST00000507982 486 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AC016257.1-201ENST00000550088 641 ntTSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AGGF1P7-201ENST00000562369 913 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AL354950.1-201ENST00000614150 568 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 LINC02019-201ENST00000608605 2060 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 PWAR1-201ENST00000624188 2414 ntBASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
C9orf40Q8IXQ3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC114786.1-201ENST00000512892 1415 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 RNGTTP1-201ENST00000420965 728 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 FMO7P-201ENST00000436045 768 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC006335.2-201ENST00000437993 330 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AL391987.1-201ENST00000441025 200 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 VN1R96P-201ENST00000446052 858 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 RPS27AP2-201ENST00000457576 465 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 ST13P12-201ENST00000508958 1094 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC021146.10-201ENST00000515628 706 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 IGLV3-24-201ENST00000517477 197 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 DHFRP1-201ENST00000579682 559 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC060780.2-201ENST00000589047 198 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AC025857.2-201ENST00000602711 238 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 CU639417.4-201ENST00000623928 207 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AL034546.1-201ENST00000623740 3693 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 AL137141.1-201ENST00000624622 4836 ntBASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
C9orf40Q8IXQ3 KYNUP3-201ENST00000574386 1341 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 SYT14P1-202ENST00000600441 1448 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 RNA5SP435-201ENST00000364044 108 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 RN7SKP81-201ENST00000365603 331 ntBASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.23□□□□□ -1.57
C9orf40Q8IXQ3 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 112.8 ms