Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 STX3-208ENST00000641815 3236 ntBASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.58□□□□□ -1.52
NUP54Q7Z3B4 GNL2P1-201ENST00000451274 2190 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC016583.1-201ENST00000624221 2431 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 GNG5P2-201ENST00000372054 207 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 MIR621-201ENST00000384919 96 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 MTND3P20-201ENST00000407663 186 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 RPL36A-209ENST00000553110 429 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 RPA2P1-201ENST00000556557 721 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 NPM1P45-201ENST00000583151 559 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AP001005.3-201ENST00000622049 129 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC104820.1-201ENST00000624183 307 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AL357562.1-201ENST00000624911 609 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 SAMMSON-209ENST00000641222 1100 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 CASC19-281ENST00000642118 1554 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 QRSL1P1-201ENST00000400977 1540 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AL161756.3-201ENST00000641216 2071 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AL592429.1-201ENST00000403909 1473 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 RBPJP7-201ENST00000442803 1447 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 RBPJP5-201ENST00000449433 1447 ntBASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.57□□□□□ -1.52
NUP54Q7Z3B4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC132825.1-201ENST00000463573 2247 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC010266.2-201ENST00000564741 3255 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AP002512.4-202ENST00000641599 4530 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 MIR130B-202ENST00000385018 82 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC004386.1-201ENST00000393214 761 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL365220.1-201ENST00000432923 399 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 ARL4AP4-201ENST00000434170 518 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL731534.1-201ENST00000434711 269 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC110602.1-201ENST00000437414 318 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 H3F3BP1-201ENST00000440551 403 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC005077.1-201ENST00000449226 375 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AP002884.1-201ENST00000479691 655 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AL158068.1-201ENST00000506116 616 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC093815.1-201ENST00000508637 280 ntBASIC5.56□□□□□ -1.52
NUP54Q7Z3B4 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms