Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CCDC58Q4VC31 OR4F13P-202ENST00000560066 2054 ntBASIC5.08□□□□□ -1.6
CCDC58Q4VC31 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 SPANXN2-201ENST00000598475 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 RN7SKP108-201ENST00000411367 328 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AL133482.1-201ENST00000415988 498 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 MEAF6P1-201ENST00000416092 327 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC009784.1-201ENST00000426484 460 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC092447.2-201ENST00000435487 669 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC010086.1-201ENST00000437359 1052 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ARMC4P1-201ENST00000438905 707 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 RBMY2HP-201ENST00000457961 720 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AL157777.1-201ENST00000468100 304 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 H3F3AP5-201ENST00000475267 429 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ATP5LP5-201ENST00000483050 299 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC074255.1-201ENST00000511259 501 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ZNF519P4-201ENST00000514008 125 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 SEPT10P1-201ENST00000517342 1162 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC005833.3-202ENST00000544741 770 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC139697.1-201ENST00000548429 745 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC091078.2-201ENST00000557145 559 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 RN7SL657P-201ENST00000582431 293 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 MIR4701-201ENST00000583094 63 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC073389.3-201ENST00000609434 935 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 AL034549.2-201ENST00000618285 3373 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 MFSD8-219ENST00000641228 2559 ntBASIC5.07□□□□□ -1.6
CCDC58Q4VC31 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
CCDC58Q4VC31 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AL121886.1-201ENST00000358609 435 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 ZNF66-202ENST00000360204 1120 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 RN7SKP77-201ENST00000363261 353 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 RPS14P4-201ENST00000415880 418 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 TMEM183AP1-205ENST00000432739 290 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 PCBP2P1-201ENST00000437262 977 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 EIF5AP4-201ENST00000441206 465 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 RNA5SP103-201ENST00000459503 118 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 RPS23P2-201ENST00000463671 415 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 RN7SL269P-201ENST00000467795 305 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 RPS4XP17-201ENST00000479057 754 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AP002453.1-201ENST00000492327 668 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 SLC25A51P2-201ENST00000535708 889 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AL136131.3-201ENST00000607600 188 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AL021918.2-201ENST00000613415 194 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AL512652.1-201ENST00000619006 500 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 AC010325.3-201ENST00000641084 394 ntBASIC5.06□□□□□ -1.6
CCDC58Q4VC31 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC58Q4VC31 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms