Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 NPM1P38-201ENST00000403835 865 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 RNU6-564P-201ENST00000410983 104 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.7□□□□□ -1.5
CDK3Q00526 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK3Q00526 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK3Q00526 AL662874.1-201ENST00000426065 230 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK3Q00526 RPS3AP38-201ENST00000435889 763 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK3Q00526 AC002504.1-201ENST00000438281 691 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 BTBD7P2-201ENST00000441962 620 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK3Q00526 RPS27AP2-201ENST00000457576 465 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC023141.9-201ENST00000458734 412 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 RN7SL717P-201ENST00000478343 297 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 ATG10-AS1-201ENST00000504846 648 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC105384.2-201ENST00000508433 640 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC106872.4-201ENST00000510050 523 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC074255.1-201ENST00000511259 501 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.7□□□□□ -1.5
CDK3Q00526 SNORA43.3-201ENST00000517240 103 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 NPM1P52-201ENST00000518264 846 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.7□□□□□ -1.5
CDK3Q00526 MTND2P7-201ENST00000521337 640 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC090753.1-201ENST00000522087 331 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK3Q00526 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK3Q00526 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK3Q00526 AL121594.2-201ENST00000541658 472 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 SNRPGP1-201ENST00000553864 222 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK3Q00526 AC096996.1-201ENST00000563813 325 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK3Q00526 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.7□□□□□ -1.5
CDK3Q00526 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK3Q00526 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 MIR6729-201ENST00000618194 65 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
CDK3Q00526 ZNF101P1-201ENST00000435701 1720 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
CDK3Q00526 AC007842.1-201ENST00000597336 2039 ntBASIC5.7□□□□□ -1.5
CDK3Q00526 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
CDK3Q00526 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.7□□□□□ -1.5
CDK3Q00526 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC5.7□□□□□ -1.5
CDK3Q00526 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK3Q00526 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK3Q00526 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
CDK3Q00526 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK3Q00526 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK3Q00526 RNA5SP242-201ENST00000364171 118 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK3Q00526 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 RPL23AP18-201ENST00000416139 468 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 RCC2P2-201ENST00000422174 918 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 AC007064.3-201ENST00000422608 359 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 RPL12P16-201ENST00000431098 498 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 TRIM60P13-201ENST00000432350 1283 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK3Q00526 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK3Q00526 AL390879.1-201ENST00000439143 386 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK3Q00526 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 RN7SL570P-201ENST00000484405 292 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC138409.2-202ENST00000507274 458 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 AC138866.2-201ENST00000508650 584 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC087272.1-201ENST00000523624 533 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK3Q00526 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK3Q00526 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.69□□□□□ -1.5
CDK3Q00526 IGBP1P1-201ENST00000554337 1009 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 FAM60CP-201ENST00000591086 664 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 AC006115.2-201ENST00000596823 202 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK3Q00526 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
CDK3Q00526 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.69□□□□□ -1.5
CDK3Q00526 AC068769.1-201ENST00000474767 2426 ntBASIC5.69□□□□□ -1.5
CDK3Q00526 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
CDK3Q00526 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CDK3Q00526 AC007159.1-201ENST00000566529 4706 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 74 ms