Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC093775.1-201ENST00000624154 1868 ntBASIC4.94□□□□□ -1.62
ACTBP60709 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC4.94□□□□□ -1.62
ACTBP60709 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
ACTBP60709 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 MIR137-201ENST00000385223 102 ntBASIC4.94□□□□□ -1.62
ACTBP60709 U3.28-201ENST00000391249 210 ntBASIC4.94□□□□□ -1.62
ACTBP60709 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC4.94□□□□□ -1.62
ACTBP60709 RPL35AP31-201ENST00000418340 337 ntBASIC4.94□□□□□ -1.62
ACTBP60709 THEM7P-201ENST00000419556 672 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AL139158.1-201ENST00000424719 340 ntBASIC4.94□□□□□ -1.62
ACTBP60709 HMGN2P27-201ENST00000427352 270 ntBASIC4.94□□□□□ -1.62
ACTBP60709 RPS7P3-201ENST00000443360 580 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC4.94□□□□□ -1.62
ACTBP60709 AP002856.1-201ENST00000447864 562 ntTSL 4 BASIC4.94□□□□□ -1.62
ACTBP60709 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 OR7E22P-201ENST00000478335 1035 ntBASIC4.94□□□□□ -1.62
ACTBP60709 RPL12P30-201ENST00000488389 499 ntBASIC4.94□□□□□ -1.62
ACTBP60709 EIF4E2P2-201ENST00000492033 736 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AP002453.1-201ENST00000492327 668 ntBASIC4.94□□□□□ -1.62
ACTBP60709 RN7SL568P-201ENST00000493069 298 ntBASIC4.94□□□□□ -1.62
ACTBP60709 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC4.94□□□□□ -1.62
ACTBP60709 AC108103.1-201ENST00000511286 446 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.94□□□□□ -1.62
ACTBP60709 RNA5SP441-201ENST00000516809 88 ntBASIC4.94□□□□□ -1.62
ACTBP60709 OR4A41P-201ENST00000533053 928 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AL359219.2-201ENST00000555184 348 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 AC121758.1-202ENST00000556917 658 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC4.94□□□□□ -1.62
ACTBP60709 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.94□□□□□ -1.62
ACTBP60709 AC138207.8-204ENST00000579588 527 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AP005136.2-201ENST00000583253 1049 ntBASIC4.94□□□□□ -1.62
ACTBP60709 MIR7853-201ENST00000584820 132 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 AC005828.7-201ENST00000607331 556 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AL135999.3-201ENST00000610501 812 ntBASIC4.94□□□□□ -1.62
ACTBP60709 uc_338.29-201ENST00000615099 168 ntBASIC4.94□□□□□ -1.62
ACTBP60709 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 AC016542.2-201ENST00000624201 619 ntBASIC4.94□□□□□ -1.62
ACTBP60709 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 5S_rRNA.29-201ENST00000641250 107 ntBASIC4.94□□□□□ -1.62
ACTBP60709 AL360270.2-201ENST00000562952 5985 ntBASIC4.94□□□□□ -1.62
ACTBP60709 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
ACTBP60709 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
ACTBP60709 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC4.94□□□□□ -1.62
ACTBP60709 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC4.94□□□□□ -1.62
ACTBP60709 EIF3EP1-201ENST00000433978 1316 ntBASIC4.94□□□□□ -1.62
ACTBP60709 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.94□□□□□ -1.62
ACTBP60709 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 ZNF215-205ENST00000529903 1396 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC4.93□□□□□ -1.62
ACTBP60709 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTBP60709 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC4.93□□□□□ -1.62
ACTBP60709 RNA5SP198-201ENST00000410376 127 ntBASIC4.93□□□□□ -1.62
ACTBP60709 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTBP60709 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC4.93□□□□□ -1.62
ACTBP60709 AL359885.1-201ENST00000415786 903 ntBASIC4.93□□□□□ -1.62
ACTBP60709 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC4.93□□□□□ -1.62
ACTBP60709 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTBP60709 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTBP60709 AL589765.3-201ENST00000446084 462 ntBASIC4.93□□□□□ -1.62
ACTBP60709 ZNF619P1-201ENST00000446539 752 ntBASIC4.93□□□□□ -1.62
ACTBP60709 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC4.93□□□□□ -1.62
ACTBP60709 RN7SL362P-201ENST00000494228 267 ntBASIC4.93□□□□□ -1.62
ACTBP60709 RPS17P5-201ENST00000498293 408 ntBASIC4.93□□□□□ -1.62
ACTBP60709 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTBP60709 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.93□□□□□ -1.62
ACTBP60709 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTBP60709 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC4.93□□□□□ -1.62
ACTBP60709 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTBP60709 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.93□□□□□ -1.62
ACTBP60709 NMNAT1P5-201ENST00000559657 841 ntBASIC4.93□□□□□ -1.62
ACTBP60709 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTBP60709 AL078601.3-201ENST00000573303 535 ntBASIC4.93□□□□□ -1.62
ACTBP60709 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC4.93□□□□□ -1.62
ACTBP60709 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.93□□□□□ -1.62
ACTBP60709 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
ACTBP60709 ZNF682-208ENST00000596019 552 ntTSL 5 BASIC4.93□□□□□ -1.62
ACTBP60709 IGFL2-AS1-206ENST00000601263 446 ntTSL 3 BASIC4.93□□□□□ -1.62
ACTBP60709 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.93□□□□□ -1.62
ACTBP60709 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.93□□□□□ -1.62
ACTBP60709 AF117829.2-201ENST00000619538 361 ntBASIC4.93□□□□□ -1.62
ACTBP60709 AC092376.2-201ENST00000622621 4116 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 69 ms