Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COPB1P53618 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPB1P53618 PKIB-203ENST00000368446 556 ntTSL 2 BASIC6.38□□□□□ -1.39
COPB1P53618 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COPB1P53618 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COPB1P53618 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC6.38□□□□□ -1.39
COPB1P53618 AC023141.8-201ENST00000442554 208 ntBASIC6.38□□□□□ -1.39
COPB1P53618 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.38□□□□□ -1.39
COPB1P53618 BMS1P10-201ENST00000443754 1120 ntBASIC6.38□□□□□ -1.39
COPB1P53618 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 RNU1-88P-201ENST00000459274 128 ntBASIC6.38□□□□□ -1.39
COPB1P53618 OR7E157P-201ENST00000494376 911 ntBASIC6.38□□□□□ -1.39
COPB1P53618 MTND3P24-201ENST00000506306 329 ntBASIC6.38□□□□□ -1.39
COPB1P53618 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.38□□□□□ -1.39
COPB1P53618 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 Vault.2-201ENST00000516519 98 ntBASIC6.38□□□□□ -1.39
COPB1P53618 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.38□□□□□ -1.39
COPB1P53618 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 AC012414.2-201ENST00000559474 187 ntBASIC6.38□□□□□ -1.39
COPB1P53618 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC6.38□□□□□ -1.39
COPB1P53618 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.38□□□□□ -1.39
COPB1P53618 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC6.38□□□□□ -1.39
COPB1P53618 AP005119.1-201ENST00000580956 292 ntBASIC6.38□□□□□ -1.39
COPB1P53618 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COPB1P53618 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
COPB1P53618 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.38□□□□□ -1.39
COPB1P53618 AC040174.2-201ENST00000602701 465 ntBASIC6.38□□□□□ -1.39
COPB1P53618 AC135803.1-201ENST00000608748 565 ntBASIC6.38□□□□□ -1.39
COPB1P53618 MKKS-203ENST00000609375 882 ntTSL 2 BASIC6.38□□□□□ -1.39
COPB1P53618 AC084824.5-201ENST00000612009 413 ntBASIC6.38□□□□□ -1.39
COPB1P53618 AC097641.3-201ENST00000613523 464 ntBASIC6.38□□□□□ -1.39
COPB1P53618 MIR6071-201ENST00000616741 78 ntBASIC6.38□□□□□ -1.39
COPB1P53618 SAMMSON-210ENST00000641260 1308 ntBASIC6.38□□□□□ -1.39
COPB1P53618 SAMM50P1-201ENST00000455403 1399 ntBASIC6.38□□□□□ -1.39
COPB1P53618 RNF19BPY-201ENST00000458209 1550 ntBASIC6.38□□□□□ -1.39
COPB1P53618 AC008627.1-201ENST00000517511 1704 ntBASIC6.38□□□□□ -1.39
COPB1P53618 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COPB1P53618 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COPB1P53618 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC6.37□□□□□ -1.39
COPB1P53618 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.37□□□□□ -1.39
COPB1P53618 RNU6-670P-201ENST00000364312 104 ntBASIC6.37□□□□□ -1.39
COPB1P53618 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COPB1P53618 YWHAZP6-201ENST00000399764 738 ntBASIC6.37□□□□□ -1.39
COPB1P53618 MIR1275-201ENST00000408770 80 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AL158827.1-201ENST00000416300 391 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.37□□□□□ -1.39
COPB1P53618 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.37□□□□□ -1.39
COPB1P53618 RPS10P18-201ENST00000442662 495 ntBASIC6.37□□□□□ -1.39
COPB1P53618 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.37□□□□□ -1.39
COPB1P53618 AC106822.1-201ENST00000502647 526 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AC105384.2-201ENST00000508433 640 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AC021146.10-201ENST00000515628 706 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AC104997.1-201ENST00000519761 717 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.37□□□□□ -1.39
COPB1P53618 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.37□□□□□ -1.39
COPB1P53618 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COPB1P53618 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.37□□□□□ -1.39
COPB1P53618 NPM1P5-201ENST00000557228 838 ntBASIC6.37□□□□□ -1.39
COPB1P53618 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC6.37□□□□□ -1.39
COPB1P53618 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC6.37□□□□□ -1.39
COPB1P53618 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.37□□□□□ -1.39
COPB1P53618 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.37□□□□□ -1.39
COPB1P53618 AC079315.1-201ENST00000602952 623 ntBASIC6.37□□□□□ -1.39
COPB1P53618 BNIP3P19-201ENST00000605397 577 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AC034229.4-201ENST00000607861 441 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AC016590.3-201ENST00000611171 753 ntBASIC6.37□□□□□ -1.39
COPB1P53618 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 AC005618.4-201ENST00000625053 554 ntBASIC6.37□□□□□ -1.39
COPB1P53618 AL357140.4-201ENST00000636827 412 ntBASIC6.37□□□□□ -1.39
COPB1P53618 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 AC004656.1-201ENST00000568479 4951 ntBASIC6.37□□□□□ -1.39
COPB1P53618 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COPB1P53618 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COPB1P53618 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
COPB1P53618 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPB1P53618 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPB1P53618 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
COPB1P53618 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COPB1P53618 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
COPB1P53618 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.36□□□□□ -1.39
COPB1P53618 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
COPB1P53618 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPB1P53618 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC6.36□□□□□ -1.39
COPB1P53618 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPB1P53618 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.36□□□□□ -1.39
COPB1P53618 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.36□□□□□ -1.39
COPB1P53618 AL136520.1-201ENST00000600311 1322 ntBASIC6.36□□□□□ -1.39
COPB1P53618 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
COPB1P53618 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
COPB1P53618 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms