Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.51□□□□□ -1.37
CIITAP33076 AC013470.3-201ENST00000420252 1194 ntBASIC6.51□□□□□ -1.37
CIITAP33076 RPL34P3-201ENST00000421454 338 ntBASIC6.51□□□□□ -1.37
CIITAP33076 BX119904.3-201ENST00000428194 957 ntBASIC6.51□□□□□ -1.37
CIITAP33076 SDR42E1P3-201ENST00000438345 502 ntBASIC6.51□□□□□ -1.37
CIITAP33076 ZNF736P1Y-201ENST00000440402 1276 ntBASIC6.51□□□□□ -1.37
CIITAP33076 AC064862.4-201ENST00000442180 334 ntBASIC6.51□□□□□ -1.37
CIITAP33076 HMGN1P36-201ENST00000446623 298 ntBASIC6.51□□□□□ -1.37
CIITAP33076 LRRC37A14P-201ENST00000452297 462 ntBASIC6.51□□□□□ -1.37
CIITAP33076 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.51□□□□□ -1.37
CIITAP33076 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.51□□□□□ -1.37
CIITAP33076 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC6.51□□□□□ -1.37
CIITAP33076 MTATP6P1-201ENST00000514057 681 ntBASIC6.51□□□□□ -1.37
CIITAP33076 RN7SKP5-201ENST00000517045 272 ntBASIC6.51□□□□□ -1.37
CIITAP33076 MRPS16P1-201ENST00000523462 412 ntBASIC6.51□□□□□ -1.37
CIITAP33076 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.51□□□□□ -1.37
CIITAP33076 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CIITAP33076 AC138473.1-201ENST00000605717 526 ntBASIC6.51□□□□□ -1.37
CIITAP33076 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.51□□□□□ -1.37
CIITAP33076 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.51□□□□□ -1.37
CIITAP33076 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CIITAP33076 AC130360.2-201ENST00000533477 1556 ntBASIC6.51□□□□□ -1.37
CIITAP33076 OFD1P17-201ENST00000437639 3018 ntBASIC6.51□□□□□ -1.37
CIITAP33076 AC027279.1-201ENST00000568885 4284 ntBASIC6.51□□□□□ -1.37
CIITAP33076 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
CIITAP33076 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CIITAP33076 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
CIITAP33076 BX284613.1-201ENST00000452221 1641 ntBASIC6.5□□□□□ -1.37
CIITAP33076 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.5□□□□□ -1.37
CIITAP33076 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.5□□□□□ -1.37
CIITAP33076 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.5□□□□□ -1.37
CIITAP33076 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.5□□□□□ -1.37
CIITAP33076 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.5□□□□□ -1.37
CIITAP33076 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 KARSP1-201ENST00000451871 1752 ntBASIC6.5□□□□□ -1.37
CIITAP33076 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.5□□□□□ -1.37
CIITAP33076 MIR130A-201ENST00000385274 89 ntBASIC6.5□□□□□ -1.37
CIITAP33076 SNORA17A-201ENST00000391185 133 ntBASIC6.5□□□□□ -1.37
CIITAP33076 RPL23AP18-201ENST00000416139 468 ntBASIC6.5□□□□□ -1.37
CIITAP33076 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6.5□□□□□ -1.37
CIITAP33076 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.5□□□□□ -1.37
CIITAP33076 OR5W1P-201ENST00000423705 938 ntBASIC6.5□□□□□ -1.37
CIITAP33076 VN1R21P-201ENST00000426703 765 ntBASIC6.5□□□□□ -1.37
CIITAP33076 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 KRT8P51-201ENST00000438938 274 ntBASIC6.5□□□□□ -1.37
CIITAP33076 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.5□□□□□ -1.37
CIITAP33076 AL161636.2-201ENST00000445179 927 ntBASIC6.5□□□□□ -1.37
CIITAP33076 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.5□□□□□ -1.37
CIITAP33076 AL513343.1-201ENST00000451818 792 ntBASIC6.5□□□□□ -1.37
CIITAP33076 AL358876.1-201ENST00000453364 1075 ntBASIC6.5□□□□□ -1.37
CIITAP33076 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 AC135999.1-201ENST00000478962 479 ntBASIC6.5□□□□□ -1.37
CIITAP33076 RPL7P51-201ENST00000490532 749 ntBASIC6.5□□□□□ -1.37
CIITAP33076 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 RNU6-615P-201ENST00000516065 106 ntBASIC6.5□□□□□ -1.37
CIITAP33076 TMEM97P2-201ENST00000517841 403 ntBASIC6.5□□□□□ -1.37
CIITAP33076 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.5□□□□□ -1.37
CIITAP33076 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.5□□□□□ -1.37
CIITAP33076 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.5□□□□□ -1.37
CIITAP33076 AC234775.3-201ENST00000564612 656 ntBASIC6.5□□□□□ -1.37
CIITAP33076 AC020978.7-201ENST00000575953 1187 ntBASIC6.5□□□□□ -1.37
CIITAP33076 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.5□□□□□ -1.37
CIITAP33076 AL352984.2-201ENST00000611153 546 ntBASIC6.5□□□□□ -1.37
CIITAP33076 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 SNORA17.5-201ENST00000630429 132 ntBASIC6.5□□□□□ -1.37
CIITAP33076 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC6.5□□□□□ -1.37
CIITAP33076 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
CIITAP33076 GTF2IP4-201ENST00000453092 2054 ntBASIC6.49□□□□□ -1.37
CIITAP33076 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 Z95114.1-201ENST00000624264 14574 ntBASIC6.49□□□□□ -1.37
CIITAP33076 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
CIITAP33076 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
CIITAP33076 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
CIITAP33076 TMSB4XP4-201ENST00000323496 618 ntBASIC6.49□□□□□ -1.37
CIITAP33076 RNA5SP46-201ENST00000362370 120 ntBASIC6.49□□□□□ -1.37
CIITAP33076 RNA5SP30-201ENST00000365552 115 ntBASIC6.49□□□□□ -1.37
CIITAP33076 RNA5SP91-201ENST00000390902 119 ntBASIC6.49□□□□□ -1.37
CIITAP33076 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
CIITAP33076 FIGN-202ENST00000409634 746 ntTSL 5 BASIC6.49□□□□□ -1.37
CIITAP33076 AL596448.1-201ENST00000415024 392 ntBASIC6.49□□□□□ -1.37
CIITAP33076 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms