Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC7.26□□□□□ -1.25
COL3A1P02461 RPL7P45-201ENST00000455851 743 ntBASIC7.26□□□□□ -1.25
COL3A1P02461 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.26□□□□□ -1.25
COL3A1P02461 RN7SL356P-201ENST00000582228 248 ntBASIC7.26□□□□□ -1.25
COL3A1P02461 H3F3BP2-201ENST00000583907 357 ntBASIC7.26□□□□□ -1.25
COL3A1P02461 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC7.26□□□□□ -1.25
COL3A1P02461 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.26□□□□□ -1.25
COL3A1P02461 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL3A1P02461 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC7.26□□□□□ -1.25
COL3A1P02461 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC7.26□□□□□ -1.25
COL3A1P02461 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.26□□□□□ -1.25
COL3A1P02461 AC007620.2-201ENST00000600539 1697 ntTSL 5 BASIC7.26□□□□□ -1.25
COL3A1P02461 CDY3P-201ENST00000454543 1618 ntBASIC7.26□□□□□ -1.25
COL3A1P02461 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
COL3A1P02461 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL3A1P02461 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC7.25□□□□□ -1.25
COL3A1P02461 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL3A1P02461 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC7.25□□□□□ -1.25
COL3A1P02461 AC005532.2-201ENST00000467154 373 ntBASIC7.25□□□□□ -1.25
COL3A1P02461 RNA5SP373-201ENST00000517271 95 ntBASIC7.25□□□□□ -1.25
COL3A1P02461 AP004607.2-201ENST00000533949 322 ntBASIC7.25□□□□□ -1.25
COL3A1P02461 OR11J2P-201ENST00000555298 907 ntBASIC7.25□□□□□ -1.25
COL3A1P02461 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.25□□□□□ -1.25
COL3A1P02461 AL512329.2-201ENST00000607350 548 ntBASIC7.25□□□□□ -1.25
COL3A1P02461 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC7.25□□□□□ -1.25
COL3A1P02461 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL3A1P02461 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL3A1P02461 AC010329.1-201ENST00000593903 8328 ntBASIC7.25□□□□□ -1.25
COL3A1P02461 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.25□□□□□ -1.25
COL3A1P02461 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
COL3A1P02461 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
COL3A1P02461 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
COL3A1P02461 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC7.25□□□□□ -1.25
COL3A1P02461 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC7.25□□□□□ -1.25
COL3A1P02461 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.24□□□□□ -1.25
COL3A1P02461 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL3A1P02461 MIR1286-201ENST00000408112 78 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 MARK2P12-201ENST00000420129 585 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 RPL7P56-201ENST00000429441 717 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 MED28P3-201ENST00000444288 531 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 RSL24D1P2-201ENST00000445584 366 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL3A1P02461 RN7SL51P-201ENST00000468230 285 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 RWDD4P1-201ENST00000488019 565 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 TRIM36-IT1-201ENST00000503723 881 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC127381.1-201ENST00000555979 939 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC005014.3-201ENST00000605985 190 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 CYP4F35P-202ENST00000636121 390 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC7.24□□□□□ -1.25
COL3A1P02461 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC053481.2-202ENST00000582394 1500 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 OR55B1P-203ENST00000641518 2602 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AL353796.1-201ENST00000561542 3241 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC7.24□□□□□ -1.25
COL3A1P02461 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 RNA5SP487-201ENST00000410186 122 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC7.24□□□□□ -1.25
COL3A1P02461 GSTM5P1-201ENST00000434751 660 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 SDR42E1P3-201ENST00000438345 502 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 GAPDHP25-201ENST00000447061 1001 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 IGBP1P3-201ENST00000447449 1000 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC7.24□□□□□ -1.25
COL3A1P02461 RN7SL188P-201ENST00000469842 285 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC083923.2-201ENST00000519880 574 ntTSL 4 BASIC7.24□□□□□ -1.25
COL3A1P02461 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
COL3A1P02461 MIR1269B-201ENST00000580405 75 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AC025857.2-201ENST00000602711 238 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AC093388.1-201ENST00000609166 430 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AC008115.4-201ENST00000619780 775 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.24□□□□□ -1.25
COL3A1P02461 AC000095.2-202ENST00000637415 154 ntBASIC7.24□□□□□ -1.25
COL3A1P02461 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC7.23□□□□□ -1.25
COL3A1P02461 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL3A1P02461 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.23□□□□□ -1.25
COL3A1P02461 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
COL3A1P02461 KCNAB1-212ENST00000490337 3122 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL3A1P02461 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
COL3A1P02461 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 138.2 ms