Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC022360.1-201ENST00000521058 340 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 RPL23AP53-201ENST00000521854 457 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC135388.1-201ENST00000536512 353 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AP002383.5-201ENST00000542623 1161 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 APAF1-211ENST00000552268 1143 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 PPIAP6-201ENST00000557078 499 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC007494.2-201ENST00000563757 764 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 MIR3911-201ENST00000577791 109 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 TPGS2-204ENST00000587129 841 ntTSL 4 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC010761.6-201ENST00000587898 197 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 RN7SL778P-201ENST00000607160 297 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 PART1_3.1-201ENST00000619680 131 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC005790.1-201ENST00000619774 450 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 MIR6877-201ENST00000620452 64 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 MIR7154-201ENST00000620673 73 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 MIR8080-201ENST00000622224 89 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 MIR4727-201ENST00000622232 55 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC004232.3-201ENST00000622977 525 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 LINC01427-203ENST00000635277 781 ntTSL 5 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 RPL36AP21-202ENST00000639134 430 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AP000356.4-201ENST00000639500 172 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC119674.1-209ENST00000642031 997 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 USP9YP4-201ENST00000424401 1745 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 AC245100.2-201ENST00000454544 1679 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 RPL31P11-201ENST00000426558 1558 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 SMG1P6-201ENST00000532337 2930 ntBASIC2.78□□□□□ -1.96
LINC01558Q9Y6Z2 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC2.78□□□□□ -1.97
LINC01558Q9Y6Z2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC2.78□□□□□ -1.97
LINC01558Q9Y6Z2 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 MFSD1P1-201ENST00000576210 1327 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 OR11H5P-202ENST00000641612 1325 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 MTND5P23-201ENST00000430812 1655 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 MYL12A-201ENST00000217652 1229 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 CLC-201ENST00000221804 635 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 OR9G4-201ENST00000302957 984 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 KRTAP6-2-201ENST00000334897 313 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 RNA5SP52-201ENST00000362448 134 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 SNORD15A-201ENST00000384214 148 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 SNORA7A-201ENST00000384765 139 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 MIR3074-201ENST00000384885 81 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AL592291.1-201ENST00000403830 352 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 CABYR-205ENST00000415309 824 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 RPS4XP5-201ENST00000419038 768 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 ZBTB8OSP2-201ENST00000423890 504 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AL365295.1-204ENST00000425648 553 ntTSL 4 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AKR1B10P1-201ENST00000425765 942 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AC004160.2-201ENST00000425837 563 ntTSL 4 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AC005033.1-201ENST00000428904 813 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 IGLVIVOR22-2-201ENST00000430579 330 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 AC093414.1-201ENST00000434712 514 ntBASIC2.77□□□□□ -1.97
LINC01558Q9Y6Z2 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms