Protein–RNA interactions for Protein: Q9BYB0

SHANK3, SH3 and multiple ankyrin repeat domains protein 3, humanhuman

Predictions only

Length 1,731 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3Q9BYB0 HIRAP1-201ENST00000605318 787 ntBASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 AC135068.5-201ENST00000624197 983 ntBASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 SLC12A1-202ENST00000380993 4707 ntAPPRIS P3 TSL 5 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 HELB-201ENST00000247815 12866 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 CTNND1-222ENST00000529919 4780 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 KCNA2-214ENST00000640774 6673 ntTSL 5 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 OLMALINC-203ENST00000641087 3779 ntBASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 LARS-201ENST00000274562 2213 ntTSL 2 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 GABRB3-216ENST00000628124 5581 ntTSL 2 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
SHANK3Q9BYB0 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 RN7SKP6-201ENST00000364795 319 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 RPS4XP9-201ENST00000405151 780 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 USP24P1-201ENST00000433802 779 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 SLC25A51P1-201ENST00000468432 871 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 PDCL3P4-201ENST00000489621 720 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC096754.1-201ENST00000508904 818 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 EIF3KP3-201ENST00000514461 639 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 PMS2P3-207ENST00000529061 717 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 OR5AM1P-201ENST00000532136 1032 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC095055.1-201ENST00000603472 1113 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC104687.2-201ENST00000604442 342 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 NANOGP3-201ENST00000605855 286 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AP005432.2-201ENST00000608162 586 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 WBP1LP8-201ENST00000617401 327 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 HOMEZ-203ENST00000561013 3337 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 CTNND1-234ENST00000532844 6012 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 SNORA70.2-201ENST00000364506 135 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC211486.3-201ENST00000412694 621 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 MEMO1P4-201ENST00000453590 386 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 SNORA70.11-201ENST00000515987 138 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 SNORA70.13-201ENST00000516116 138 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC078899.1-201ENST00000521432 1185 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AP002373.2-201ENST00000541631 1060 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC136624.4-201ENST00000573044 370 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 CCDC58P3-201ENST00000590792 430 ntBASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 SORBS1-219ENST00000607232 4374 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 CASP8-203ENST00000323492 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC7.1□□□□□ -1.27
SHANK3Q9BYB0 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 WBP11P1-201ENST00000562560 1931 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 CCNT1-201ENST00000261900 6973 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 SNORA70H-201ENST00000383910 135 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 SNORA70J-201ENST00000384182 135 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 SNORD56.6-201ENST00000384569 71 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 VN1R21P-201ENST00000426703 765 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 AC073072.2-201ENST00000447425 348 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 MTND6P2-201ENST00000512226 524 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 MIR4691-201ENST00000583764 85 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 DLEU1_1.1-201ENST00000618107 190 ntBASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 NLRP13-202ENST00000588751 3533 ntAPPRIS ALT2 TSL 5 BASIC7.09□□□□□ -1.27
SHANK3Q9BYB0 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms