Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM4P67936 CSNK1A1P3-201ENST00000504105 330 ntBASIC6.27□□□□□ -1.41
TPM4P67936 SETP21-201ENST00000514799 892 ntBASIC6.27□□□□□ -1.41
TPM4P67936 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM4P67936 WBP1LP3-201ENST00000523033 208 ntBASIC6.27□□□□□ -1.41
TPM4P67936 OLR1-209ENST00000543993 822 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM4P67936 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM4P67936 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM4P67936 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM4P67936 AP005119.1-201ENST00000580956 292 ntBASIC6.27□□□□□ -1.41
TPM4P67936 AC090774.2-201ENST00000584708 322 ntBASIC6.27□□□□□ -1.41
TPM4P67936 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM4P67936 AC068768.2-201ENST00000602352 343 ntBASIC6.27□□□□□ -1.41
TPM4P67936 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM4P67936 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM4P67936 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.27□□□□□ -1.41
TPM4P67936 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.27□□□□□ -1.41
TPM4P67936 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM4P67936 AL357140.4-201ENST00000636827 412 ntBASIC6.27□□□□□ -1.41
TPM4P67936 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.27□□□□□ -1.41
TPM4P67936 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TPM4P67936 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
TPM4P67936 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.27□□□□□ -1.41
TPM4P67936 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM4P67936 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC6.27□□□□□ -1.41
TPM4P67936 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM4P67936 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM4P67936 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.26□□□□□ -1.41
TPM4P67936 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM4P67936 HSPD1P9-201ENST00000420325 1636 ntBASIC6.26□□□□□ -1.41
TPM4P67936 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM4P67936 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM4P67936 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.26□□□□□ -1.41
TPM4P67936 SNORD56.6-201ENST00000384569 71 ntBASIC6.26□□□□□ -1.41
TPM4P67936 RN7SKP29-201ENST00000410957 272 ntBASIC6.26□□□□□ -1.41
TPM4P67936 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM4P67936 AL357752.1-201ENST00000412817 349 ntBASIC6.26□□□□□ -1.41
TPM4P67936 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM4P67936 HYALP1-201ENST00000417674 1279 ntBASIC6.26□□□□□ -1.41
TPM4P67936 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM4P67936 TCEA1P3-201ENST00000443005 880 ntBASIC6.26□□□□□ -1.41
TPM4P67936 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM4P67936 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM4P67936 TAAR4P-201ENST00000454843 1039 ntBASIC6.26□□□□□ -1.41
TPM4P67936 RPS4XP12-201ENST00000461747 709 ntBASIC6.26□□□□□ -1.41
TPM4P67936 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM4P67936 AC069304.1-201ENST00000491593 704 ntBASIC6.26□□□□□ -1.41
TPM4P67936 AL049874.2-201ENST00000492636 288 ntBASIC6.26□□□□□ -1.41
TPM4P67936 RN7SL57P-201ENST00000493687 290 ntBASIC6.26□□□□□ -1.41
TPM4P67936 RN7SKP253-201ENST00000516424 309 ntBASIC6.26□□□□□ -1.41
TPM4P67936 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM4P67936 ACYP1-204ENST00000555135 639 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM4P67936 AC096996.1-201ENST00000563813 325 ntBASIC6.26□□□□□ -1.41
TPM4P67936 AC023389.2-201ENST00000580031 955 ntBASIC6.26□□□□□ -1.41
TPM4P67936 MIR4776-2-201ENST00000580204 80 ntBASIC6.26□□□□□ -1.41
TPM4P67936 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.26□□□□□ -1.41
TPM4P67936 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM4P67936 AC241377.1-201ENST00000619797 406 ntBASIC6.26□□□□□ -1.41
TPM4P67936 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC6.26□□□□□ -1.41
TPM4P67936 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
TPM4P67936 AC104623.2-202ENST00000623477 4002 ntBASIC6.26□□□□□ -1.41
TPM4P67936 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM4P67936 AL359715.3-201ENST00000569267 2123 ntBASIC6.26□□□□□ -1.41
TPM4P67936 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC6.26□□□□□ -1.41
TPM4P67936 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
TPM4P67936 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC6.26□□□□□ -1.41
TPM4P67936 OR8D4-201ENST00000321355 1331 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
TPM4P67936 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
TPM4P67936 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TPM4P67936 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
TPM4P67936 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.25□□□□□ -1.41
TPM4P67936 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM4P67936 GAPDHP75-201ENST00000433910 943 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AL022324.2-201ENST00000434827 780 ntBASIC6.25□□□□□ -1.41
TPM4P67936 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 PA2G4P1-201ENST00000442248 1197 ntBASIC6.25□□□□□ -1.41
TPM4P67936 HMGB1P7-201ENST00000450921 612 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 RN7SL72P-201ENST00000460697 269 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 AC098847.1-201ENST00000473094 348 ntBASIC6.25□□□□□ -1.41
TPM4P67936 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM4P67936 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
TPM4P67936 AC113367.2-201ENST00000505749 160 ntBASIC6.25□□□□□ -1.41
TPM4P67936 AC239584.1-201ENST00000510419 732 ntTSL 5 BASIC6.25□□□□□ -1.41
TPM4P67936 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC6.25□□□□□ -1.41
TPM4P67936 AC139365.2-201ENST00000517972 253 ntBASIC6.25□□□□□ -1.41
TPM4P67936 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.25□□□□□ -1.41
TPM4P67936 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms