Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC7.4□□□□□ -1.22
RIPK4P57078 AL591135.1-201ENST00000401578 5914 ntBASIC7.4□□□□□ -1.23
RIPK4P57078 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
RIPK4P57078 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
RIPK4P57078 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RIPK4P57078 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC7.39□□□□□ -1.23
RIPK4P57078 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC7.39□□□□□ -1.23
RIPK4P57078 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RIPK4P57078 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RIPK4P57078 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
RIPK4P57078 AC025470.1-201ENST00000510053 2032 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RIPK4P57078 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC7.39□□□□□ -1.23
RIPK4P57078 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC7.39□□□□□ -1.23
RIPK4P57078 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
RIPK4P57078 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC7.39□□□□□ -1.23
RIPK4P57078 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC7.39□□□□□ -1.23
RIPK4P57078 RNU1-136P-201ENST00000384181 164 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 RPL11P3-201ENST00000395256 523 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC7.39□□□□□ -1.23
RIPK4P57078 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC7.39□□□□□ -1.23
RIPK4P57078 RNGTTP1-201ENST00000420965 728 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC7.39□□□□□ -1.23
RIPK4P57078 AC012075.1-201ENST00000436549 580 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 CYCSP51-201ENST00000443545 318 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 RN7SL466P-201ENST00000497546 295 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 MIR4311-201ENST00000580794 100 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 AC060780.2-201ENST00000589047 198 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC7.39□□□□□ -1.23
RIPK4P57078 AC093388.1-201ENST00000609166 430 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 AC018628.1-201ENST00000624147 3819 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
RIPK4P57078 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
RIPK4P57078 AC068870.1-201ENST00000563737 2455 ntBASIC7.39□□□□□ -1.23
RIPK4P57078 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
RIPK4P57078 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC7.39□□□□□ -1.23
RIPK4P57078 AC093671.1-201ENST00000624981 2929 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RIPK4P57078 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.38□□□□□ -1.23
RIPK4P57078 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 KYNUP3-201ENST00000574386 1341 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
RIPK4P57078 AC005042.1-201ENST00000393397 800 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 NPM1P37-201ENST00000403105 874 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 GAPDHP42-201ENST00000406848 981 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.38□□□□□ -1.23
RIPK4P57078 AC242426.1-201ENST00000435270 960 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 AC019185.1-201ENST00000442718 389 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC7.38□□□□□ -1.23
RIPK4P57078 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 VDAC2P4-201ENST00000452925 711 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC7.38□□□□□ -1.23
RIPK4P57078 NRBF2P4-201ENST00000520874 850 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.38□□□□□ -1.23
RIPK4P57078 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC7.38□□□□□ -1.23
RIPK4P57078 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 AP001267.4-201ENST00000602598 545 ntBASIC7.38□□□□□ -1.23
RIPK4P57078 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC7.38□□□□□ -1.23
RIPK4P57078 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.38□□□□□ -1.23
RIPK4P57078 ADGRE1-202ENST00000312053 3128 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC7.38□□□□□ -1.23
RIPK4P57078 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC7.38□□□□□ -1.23
RIPK4P57078 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
RIPK4P57078 AC020656.2-201ENST00000613291 5309 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RIPK4P57078 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
RIPK4P57078 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
RIPK4P57078 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
RIPK4P57078 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC7.37□□□□□ -1.23
RIPK4P57078 AC137056.2-201ENST00000624055 1958 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RIPK4P57078 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC7.37□□□□□ -1.23
RIPK4P57078 RN7SKP124-201ENST00000364730 341 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 GABARAPL3-201ENST00000412799 354 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 AC079355.1-201ENST00000421770 223 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC7.37□□□□□ -1.23
RIPK4P57078 AL590399.2-201ENST00000427536 309 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC7.37□□□□□ -1.23
RIPK4P57078 EIF4A1P6-201ENST00000448133 1210 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
RIPK4P57078 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC7.37□□□□□ -1.23
RIPK4P57078 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC7.37□□□□□ -1.23
RIPK4P57078 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC7.37□□□□□ -1.23
RIPK4P57078 OR2AF1P-201ENST00000454899 889 ntBASIC7.37□□□□□ -1.23
RIPK4P57078 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC7.37□□□□□ -1.23
RIPK4P57078 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC7.37□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms