Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.67□□□□□ -1.5
CDH13P55290 RFPL4AP3-201ENST00000515267 345 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC5.67□□□□□ -1.5
CDH13P55290 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CDH13P55290 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC5.67□□□□□ -1.5
CDH13P55290 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH13P55290 AL121839.1-201ENST00000556233 1185 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AC121758.1-202ENST00000556917 658 ntBASIC5.67□□□□□ -1.5
CDH13P55290 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH13P55290 AC092332.1-201ENST00000563684 829 ntBASIC5.67□□□□□ -1.5
CDH13P55290 OR1E3-201ENST00000575608 948 ntBASIC5.67□□□□□ -1.5
CDH13P55290 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.67□□□□□ -1.5
CDH13P55290 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH13P55290 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.67□□□□□ -1.5
CDH13P55290 AC008833.1-201ENST00000611633 691 ntBASIC5.67□□□□□ -1.5
CDH13P55290 AC026367.3-201ENST00000619032 590 ntBASIC5.67□□□□□ -1.5
CDH13P55290 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 DYNC2LI1-210ENST00000605786 1346 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
CDH13P55290 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
CDH13P55290 PPBPP2-201ENST00000513150 1362 ntBASIC5.67□□□□□ -1.5
CDH13P55290 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
CDH13P55290 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
CDH13P55290 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 TAS2R16-201ENST00000249284 997 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDH13P55290 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
CDH13P55290 RN7SKP184-201ENST00000362348 333 ntBASIC5.66□□□□□ -1.5
CDH13P55290 RNU6-618P-201ENST00000363518 112 ntBASIC5.66□□□□□ -1.5
CDH13P55290 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
CDH13P55290 SNORA51.9-201ENST00000384295 124 ntBASIC5.66□□□□□ -1.5
CDH13P55290 RPL11P3-201ENST00000395256 523 ntBASIC5.66□□□□□ -1.5
CDH13P55290 RBBP4P5-201ENST00000398583 1266 ntBASIC5.66□□□□□ -1.5
CDH13P55290 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH13P55290 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH13P55290 AL034379.1-201ENST00000423216 253 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 AC024601.1-201ENST00000427247 524 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 BX276092.6-201ENST00000430476 250 ntBASIC5.66□□□□□ -1.5
CDH13P55290 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 GAPDHP75-201ENST00000433910 943 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AL138787.1-202ENST00000437804 898 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AC114878.1-201ENST00000441166 358 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AC015983.1-201ENST00000441577 373 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH13P55290 BX276092.8-201ENST00000455722 250 ntBASIC5.66□□□□□ -1.5
CDH13P55290 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH13P55290 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 OR9N1P-201ENST00000491296 333 ntBASIC5.66□□□□□ -1.5
CDH13P55290 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH13P55290 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH13P55290 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH13P55290 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC5.66□□□□□ -1.5
CDH13P55290 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 IGKV3D-25-201ENST00000519599 235 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH13P55290 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 ZNF322P1-201ENST00000568013 1209 ntBASIC5.66□□□□□ -1.5
CDH13P55290 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH13P55290 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
CDH13P55290 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 KATNBL1P1-201ENST00000605192 748 ntBASIC5.66□□□□□ -1.5
CDH13P55290 HIRAP1-201ENST00000605318 787 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.66□□□□□ -1.5
CDH13P55290 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 AC009032.1-201ENST00000617574 431 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AC111152.1-202ENST00000635848 339 ntBASIC5.66□□□□□ -1.5
CDH13P55290 AC079776.5-201ENST00000641920 211 ntBASIC5.66□□□□□ -1.5
CDH13P55290 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
CDH13P55290 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.66□□□□□ -1.5
CDH13P55290 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
CDH13P55290 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.65□□□□□ -1.5
CDH13P55290 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
CDH13P55290 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH13P55290 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH13P55290 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH13P55290 AP001284.1-201ENST00000528393 2118 ntBASIC5.65□□□□□ -1.5
CDH13P55290 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.65□□□□□ -1.5
CDH13P55290 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
CDH13P55290 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms