Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AP005403.1-201ENST00000579720 229 ntBASIC5.12□□□□□ -1.59
FREM3P0C091 MIR4443-201ENST00000585052 53 ntBASIC5.12□□□□□ -1.59
FREM3P0C091 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
FREM3P0C091 AC127024.6-201ENST00000621598 424 ntBASIC5.12□□□□□ -1.59
FREM3P0C091 OR52B5P-204ENST00000641744 3467 ntBASIC5.12□□□□□ -1.59
FREM3P0C091 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
FREM3P0C091 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.12□□□□□ -1.59
FREM3P0C091 KYNUP3-201ENST00000574386 1341 ntBASIC5.12□□□□□ -1.59
FREM3P0C091 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
FREM3P0C091 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.12□□□□□ -1.59
FREM3P0C091 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
FREM3P0C091 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
FREM3P0C091 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FREM3P0C091 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC5.11□□□□□ -1.59
FREM3P0C091 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
FREM3P0C091 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FREM3P0C091 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 AL596448.1-201ENST00000415024 392 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 AC021876.1-201ENST00000425959 359 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.11□□□□□ -1.59
FREM3P0C091 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.11□□□□□ -1.59
FREM3P0C091 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FREM3P0C091 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.11□□□□□ -1.59
FREM3P0C091 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 snoU109.5-201ENST00000516231 132 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 AC018809.2-201ENST00000602436 3823 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 PPATP2-201ENST00000605635 508 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FREM3P0C091 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FREM3P0C091 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.11□□□□□ -1.59
FREM3P0C091 CASC19-260ENST00000641828 2001 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 AC232271.1-201ENST00000602455 2715 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 ALB-209ENST00000503124 1741 ntTSL 5 BASIC5.11□□□□□ -1.59
FREM3P0C091 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.11□□□□□ -1.59
FREM3P0C091 ZNF402P-201ENST00000404435 3100 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
FREM3P0C091 HSPD1P7-201ENST00000447985 1686 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 MIR105-2-201ENST00000385083 81 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 RNA5SP91-201ENST00000390902 119 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 RN7SKP279-201ENST00000411383 298 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 CYCSP6-201ENST00000434498 302 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
FREM3P0C091 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.11□□□□□ -1.59
FREM3P0C091 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 AC024558.1-201ENST00000505008 528 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 GAPDHP62-201ENST00000515313 990 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 IGKV2-19-201ENST00000518132 283 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 OR4A42P-201ENST00000531397 938 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 AC137627.1-201ENST00000545761 289 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 DPPA3P2-201ENST00000553589 478 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 MIR1273E-201ENST00000581165 102 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 MIR4260-201ENST00000583107 67 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.11□□□□□ -1.59
FREM3P0C091 AC005840.5-201ENST00000619166 599 ntBASIC5.11□□□□□ -1.59
FREM3P0C091 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
FREM3P0C091 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.1□□□□□ -1.59
FREM3P0C091 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.1□□□□□ -1.59
FREM3P0C091 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
FREM3P0C091 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC5.1□□□□□ -1.59
FREM3P0C091 RNA5SP132-201ENST00000364725 118 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
FREM3P0C091 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.1□□□□□ -1.59
FREM3P0C091 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
FREM3P0C091 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.1□□□□□ -1.59
FREM3P0C091 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC5.1□□□□□ -1.59
FREM3P0C091 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC5.1□□□□□ -1.59
FREM3P0C091 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.1□□□□□ -1.59
FREM3P0C091 VDAC2P4-201ENST00000452925 711 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 AC022215.1-201ENST00000481770 362 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.1□□□□□ -1.59
FREM3P0C091 RNA5SP92-201ENST00000516437 110 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 MIR2117-201ENST00000516780 80 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.1□□□□□ -1.59
FREM3P0C091 MIR1269B-201ENST00000580405 75 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 MRO-208ENST00000588444 866 ntTSL 3 BASIC5.1□□□□□ -1.59
FREM3P0C091 AC060780.2-201ENST00000589047 198 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 AL589674.2-201ENST00000604304 337 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 AL138960.1-201ENST00000613838 513 ntBASIC5.1□□□□□ -1.59
FREM3P0C091 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
FREM3P0C091 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
FREM3P0C091 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FREM3P0C091 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FREM3P0C091 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
FREM3P0C091 U3.10-201ENST00000364459 214 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 AL158827.1-201ENST00000416300 391 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 OR10T1P-201ENST00000424327 947 ntBASIC5.09□□□□□ -1.59
FREM3P0C091 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 79.6 ms