Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.49□□□□□ -1.53
CLPTM1O96005 OSTCP4-201ENST00000424397 449 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AL139158.1-201ENST00000424719 340 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 VN1R20P-201ENST00000425215 966 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AC010086.1-201ENST00000437359 1052 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLPTM1O96005 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.49□□□□□ -1.53
CLPTM1O96005 RPS4XP12-201ENST00000461747 709 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 H3F3AP5-201ENST00000475267 429 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 RN7SL714P-201ENST00000487050 298 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 RPS27P20-201ENST00000492051 246 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 RN7SL568P-201ENST00000493069 298 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.49□□□□□ -1.53
CLPTM1O96005 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.49□□□□□ -1.53
CLPTM1O96005 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.49□□□□□ -1.53
CLPTM1O96005 RN7SKP183-201ENST00000517169 324 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AP000859.1-201ENST00000525536 307 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC5.49□□□□□ -1.53
CLPTM1O96005 OR4A41P-201ENST00000533053 928 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC5.49□□□□□ -1.53
CLPTM1O96005 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC5.49□□□□□ -1.53
CLPTM1O96005 AL121594.2-201ENST00000541658 472 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AC092865.1-201ENST00000544395 1023 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.49□□□□□ -1.53
CLPTM1O96005 AC008055.1-201ENST00000547032 609 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLPTM1O96005 AC121758.1-202ENST00000556917 658 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.49□□□□□ -1.53
CLPTM1O96005 AP000919.1-201ENST00000582850 985 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 COX6CP7-201ENST00000597056 208 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AC012467.1-201ENST00000607740 256 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 OR8G7P-201ENST00000616658 848 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AL122125.1-201ENST00000616999 600 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.49□□□□□ -1.53
CLPTM1O96005 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.49□□□□□ -1.53
CLPTM1O96005 FRG1EP-201ENST00000634469 770 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 AC132825.8-201ENST00000640783 297 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLPTM1O96005 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.49□□□□□ -1.53
CLPTM1O96005 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CLPTM1O96005 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLPTM1O96005 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CLPTM1O96005 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CLPTM1O96005 AC073136.1-201ENST00000449426 2884 ntBASIC5.49□□□□□ -1.53
CLPTM1O96005 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CLPTM1O96005 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CLPTM1O96005 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 MTCO1P15-201ENST00000529569 1526 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 MTND2P12-201ENST00000417560 1252 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 RPL21P50-201ENST00000417698 477 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 CLNS1AP1-201ENST00000435954 682 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CLPTM1O96005 OR2L9P-201ENST00000444456 913 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AL049829.1-201ENST00000465411 156 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 ENPP7P11-201ENST00000505915 627 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AC105389.1-201ENST00000510602 561 ntTSL 4 BASIC5.48□□□□□ -1.53
CLPTM1O96005 APOBEC3AP1-201ENST00000511396 287 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 SNORA74.1-201ENST00000516320 180 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 CYCSP25-201ENST00000525280 316 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AC068993.1-201ENST00000546724 589 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AC009779.8-202ENST00000607990 932 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 AL136370.1-201ENST00000608166 691 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 AC015660.5-201ENST00000623238 564 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 AC021766.1-201ENST00000624404 741 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 AC010325.3-201ENST00000641084 394 ntBASIC5.48□□□□□ -1.53
CLPTM1O96005 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.48□□□□□ -1.53
CLPTM1O96005 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CLPTM1O96005 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.48□□□□□ -1.53
CLPTM1O96005 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms